Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq159 104 2e-17 >seq159 Length=2370924 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 29951 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGC 30010 || || |||| |||| | || || || ||||||||||||||||| ||||| || || || Sbjct 478430 ACCTGTGCCACCATGCAGGTCAGCAGCGAGTAGCTGGCGATGTTGAAGGGCACGCCCAGG 478371 Query 30011 CCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAAC 30070 |||| ||| | ||||| |||||| | ||| ||||| ||||| ||||| |||||| ||| Sbjct 478370 CCCAGGTCGCACGACCGCTGGTACATCTGGCACGACAGCTCGCCGTCCGCCACGTAGAAC 478311 Query 30071 TG 30072 || Sbjct 478310 TG 478309 Score = 89.7 bits (98), Expect = 4e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 30187 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 30246 || ||| ||||| || |||||| |||||| || |||||| |||||||| || || || Sbjct 477603 CACCTGGTCCACTCCTTTCCCCGTGTAGTCGGCGTGCATGTCTGTGTACTCAGCGCCAAA 477544 Query 30247 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTG 30295 || | ||||||||| ||||||||||| |||||||| ||| || ||| Sbjct 477543 GTGGCGCCACTGGAAGCCGTACACCGGGCCCAGGTCCATCTCCTCGCTG 477495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309607694720