Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq138 89.7 1e-12 seq14 87.8 4e-12 >seq138 Length=2592956 Score = 89.7 bits (98), Expect = 1e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 178011 CAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTC 178070 |||||||| || || ||||| || |||||||| || || |||||||| || || ||||| Sbjct 406221 CAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTCATCTTCGCGGGCAAGCAGCTG 406280 Query 178071 GAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || || || |||| | |||||||||||| | || || || || || ||||| || || Sbjct 406281 GAGGACGGCCGGACCTTGGCCGATTATAACATTCAGAAGGAGTCCACGCTGCACCTGGT 406339 >seq14 Length=1676047 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || ||||||||||||||||| ||| ||| Sbjct 503681 CAGATTTTCGTCAAGACGCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCCTCGGAC 503622 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 ||||||||||| || || ||||| |||||||| || || Sbjct 503621 ACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGG 503581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203728732351040