Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20variabilis_20[refseq_20GCF_5F000147415.1_202010-09-16] 414 sequences; 46,159,512 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq8 102 1e-16 seq3 100 3e-16 >seq8 Length=1782911 Score = 102 bits (112), Expect = 1e-16 Identities = 100/128 (78%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 145762 TGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCC 145821 || || |||||| | || |||| |||||| || |||||||||||||| ||||| ||| Sbjct 1454839 TGAGCCACCATGCATGTGAGCAATGAGTAGGAAGCGATGTTGAAGGGCACGCCCAGGCCC 1454898 Query 145822 ATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGG 145881 | ||| | ||| || ||||||| ||||||| |||||| || | |||||||| |||| | Sbjct 1454899 AGGTCGCACGACCGTTGGTACATCTGGCAGCTGAGCTCGCCATCTGCCACGTAAAACT-G 1454957 Query 145882 CACAGGAG 145889 | |||||| Sbjct 1454958 CGCAGGAG 1454965 >seq3 Length=2414369 Score = 100 bits (110), Expect = 3e-16 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 36773 AGGGGGCCACGGTCATAGACCCCTCGCCCGGGTTCTACAACACCCCGGTGCTGGTGGTGG 36832 |||| |||||||| |||| ||| | | |||| |||| ||| |||||| | ||| Sbjct 132514 AGGGTGCCACGGTGCTAGAGCCCAAGGCTGGGTACTACGACAAGCCGGTGGCCACGCTGG 132573 Query 36833 ACTTTGCCAGCCTGTACCCCACCATCATCCAGGCCCACAACCTCTGCTACTCCAC 36887 |||||||||||||||||||| ||||||| ||| ||||||||||||||| |||| Sbjct 132574 ACTTTGCCAGCCTGTACCCCTCCATCATGATGGCGCACAACCTCTGCTACACCAC 132628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590073746352560