Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20variabilis_20[refseq_20GCF_5F000147415.1_202010-09-16] 414 sequences; 46,159,512 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 3e-15 >seq3 Length=2414369 Score = 96.9 bits (106), Expect = 3e-15 Identities = 126/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 57963 TTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT- 58021 ||| | ||| | || || ||||| || ||| || || || ||||| || ||| ||| Sbjct 916057 TTCTCGGAGCGCCTGATTGCGTTTGCGTGCGTGGAGGGCATCTTCTTCTCCGGCTCCTTC 915998 Query 58022 TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGA 58081 ||| || | || ||| | ||||| ||||| || ||||||||||| || || |||||| Sbjct 915997 TGCTCCA-TCTTCTGGCTCAAGAAGCGCGGACTCATGCCCGGCCTCACCTTCTCCAACGA 915939 Query 58082 GTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTAC 58133 | || |||||||||||||| || || || || ||||| ||||| ||||| Sbjct 915938 ACTCATCTCGCGCGACGAGGGACTGCACACCGACTTTGCCTGCCTGCTGTAC 915887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445764093158880