Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20variabilis_20[refseq_20GCF_5F000147415.1_202010-09-16] 414 sequences; 46,159,512 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 1e-15 >seq3 Length=2414369 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/131 (78%), Gaps = 2/131 (2%) Strand=Plus/Minus Query 125444 CGTAGAGGGCATCTTCTTTTCGGG-TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCG 125502 ||| |||||||||||||| || || | || ||| ||||||| |||||||||||||||| Sbjct 916028 CGTGGAGGGCATCTTCTTCTCCGGCTCCTTCTGCT-CCATCTTCTGGCTCAAGAAGCGCG 915970 Query 125503 GACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACT 125562 ||||||||||||| || || | ||||| | || || || |||||||| || ||| Sbjct 915969 GACTCATGCCCGGCCTCACCTTCTCCAACGAACTCATCTCGCGCGACGAGGGACTGCACA 915910 Query 125563 GTGACTTTGCC 125573 ||||||||| Sbjct 915909 CCGACTTTGCC 915899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055365018640