Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20variabilis_20[refseq_20GCF_5F000147415.1_202010-09-16] 414 sequences; 46,159,512 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 3e-11 >seq3 Length=2414369 Score = 84.2 bits (92), Expect = 3e-11 Identities = 119/166 (72%), Gaps = 1/166 (1%) Strand=Plus/Plus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || || || || || || || |||||||| || || |||| || || Sbjct 915899 GGCAAAGTCGGTGTGCAGTCCCTCGTCGCGCGAGATGAGTTCGTTGGAGAAGGTGAGGCC 915958 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 ||||||||||| | ||||| ||||| ||||||| || || || || |||||||| Sbjct 915959 GGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAGAT 916018 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAG-CAAAAGGTCG 119659 ||||||||| || || || || | || ||||| | || |||||| Sbjct 916019 GCCCTCCACGCACGCAAACGCAATCAGGCGCTCCGAGAAGAGGTCG 916064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972952049200