Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20variabilis_20[refseq_20GCF_5F000147415.1_202010-09-16] 414 sequences; 46,159,512 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3 136 5e-27 seq20 89.7 6e-13 >seq3 Length=2414369 Score = 136 bits (150), Expect = 5e-27 Identities = 126/160 (79%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| || ||||| || || || || ||||| || |||||| ||||| Sbjct 915899 GGCAAAGTCGGTGTGCAGTCCCTCGTCGCGCGAGATGAGTTCGTTGGAGAAGGTGAGGCC 915958 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 |||||||| || |||||||| | ||| | || | |||||| || |||||||||||||| Sbjct 915959 GGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAGAT 916018 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAG 117432 |||||||| ||||||||||||| |||||||| | |||| Sbjct 916019 GCCCTCCACGCACGCAAACGCAATCAGGCGCTCCGAGAAG 916058 >seq20 Length=953202 Score = 89.7 bits (98), Expect = 6e-13 Identities = 112/152 (74%), Gaps = 5/152 (3%) Strand=Plus/Minus Query 117331 CCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAG 117390 || |||||||| |||||||||| ||| | || | |||||| || || |||||| | Sbjct 640333 CCCGGCATGAGCTGGCGCTTCTTCAGCCAGAAGATGGAGCAGAAGGAGCCTGAGAAGTGG 640274 Query 117391 ATACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGC-GAGACTTTGTGTC 117449 ||||||||||| |||||| | || | || ||||| || ||| ||| | || | || Sbjct 640273 ATACCCTCCACGCACGCATATGCCACCAGCCGCTCTGCAAAGCAGCTGCTAC----TCTC 640218 Query 117450 AAACCATTTCATTGCCCATTTCGCCTTCTTCT 117481 | ||| ||||| ||||| | ||||||||||| Sbjct 640217 TATCCACTTCATCGCCCACTGCGCCTTCTTCT 640186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977746849360