Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20variabilis_20[refseq_20GCF_5F000147415.1_202010-09-16] 414 sequences; 46,159,512 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq13 84.2 2e-11 seq16 82.4 6e-11 >seq13 Length=1343205 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729 || |||||| | || |||| |||||| || ||||||||||| | | || |||| ||| Sbjct 880724 GACCAGCAGCGCCTGATTTTTGCGGGCAAGCAGCTGGAGGATGGCCGCACCCTGGCCGAC 880665 Query 107730 TACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAA 107785 |||||||| || |||||||| || ||||| ||||| || | |||| || || || Sbjct 880664 TACAACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGCGGCGGCAA 880609 >seq16 Length=1197677 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729 || |||||| | || || | |||||| || ||||||||||| | | | || |||| ||| Sbjct 458098 GACCAGCAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGATGGCCACACCCTGGCCGAC 458157 Query 107730 TACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||| || |||||||| || ||||| ||||| || | |||| || || Sbjct 458158 TACAACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGCGGCGG 458210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398874787417246