Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20variabilis_20[refseq_20GCF_5F000147415.1_202010-09-16] 414 sequences; 46,159,512 total letters Query= NC_024771.1 Length=151601 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 5e-13 >seq3 Length=2414369 Score = 89.7 bits (98), Expect = 5e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 52152 CCAGAGTGGTGAAGCAGAGGTTGTGGGCCTGGATGATGCTGGGGTACAGGCTCGCAAAGT 52211 |||| |||||| ||||||||||||| ||| |||||| |||||||||||| ||||||| Sbjct 132633 CCAGCGTGGTGTAGCAGAGGTTGTGCGCCATCATGATGGAGGGGTACAGGCTGGCAAAGT 132574 Query 52212 CCAGCACCACCACCGGGTGGACGTGAAAGCCCGACAGAGGGTCGAGCACCTTGGCGCCCT 52271 ||||| ||||||| | | ||| | || | | || || |||||| |||| |||| Sbjct 132573 CCAGCGTGGCCACCGGCTTGTCGTAGTACCCAGCCTTGGGCTCTAGCACCGTGGCACCCT 132514 Query 52272 GGTACCCCACGC 52283 || |||||| Sbjct 132513 CATATGCCACGC 132502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484992690149840