Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20variabilis_20[refseq_20GCF_5F000147415.1_202010-09-16] 414 sequences; 46,159,512 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq3 127 3e-24 seq20 89.7 6e-13 >seq3 Length=2414369 Score = 127 bits (140), Expect = 3e-24 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| || ||||| || || || || ||||| || |||||| || || Sbjct 915899 GGCAAAGTCGGTGTGCAGTCCCTCGTCGCGCGAGATGAGTTCGTTGGAGAAGGTGAGGCC 915958 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 |||||||| || |||||||| | ||| | || | |||||| || |||||||||||||| Sbjct 915959 GGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAGAT 916018 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAG 122817 |||||||| ||||||||||||| ||||| || | |||| Sbjct 916019 GCCCTCCACGCACGCAAACGCAATCAGGCGCTCCGAGAAG 916058 >seq20 Length=953202 Score = 89.7 bits (98), Expect = 6e-13 Identities = 113/154 (73%), Gaps = 5/154 (3%) Strand=Plus/Minus Query 122714 GACCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGA 122773 |||| |||||||| |||||||||| ||| | || | |||||| || || |||||| Sbjct 640335 GACCCGGCATGAGCTGGCGCTTCTTCAGCCAGAAGATGGAGCAGAAGGAGCCTGAGAAGT 640276 Query 122774 AGATACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGC-GAGACTTTGCA 122832 |||||||||||| |||||| | || | || || || || ||| ||| | ||| Sbjct 640275 GGATACCCTCCACGCACGCATATGCCACCAGCCGCTCTGCAAAGCAGCTGCTACT----C 640220 Query 122833 TCAAACCATTTCATTGCCCATTTCGCCTTCTTCT 122866 || | ||| ||||| ||||| | ||||||||||| Sbjct 640219 TCTATCCACTTCATCGCCCACTGCGCCTTCTTCT 640186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028749934400