Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq3244 98.7 9e-16
>seq3244
Length=4747
Score = 98.7 bits (108), Expect = 9e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | | || ||||| ||| | || ||||| || || |||||||| ||| |
Sbjct 3239 CCTCCTCGCAGGCGCAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 3180
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||||| |||||| ||||| || || || |||||||||||||||||||||| ||
Sbjct 3179 AGCGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGATCGGGGGGG 3120
Query 118632 ATGCCCTCCTTGTC 118645
||||| || |||||
Sbjct 3119 ATGCCTTCTTTGTC 3106
Score = 95.1 bits (104), Expect = 1e-14
Identities = 93/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||| ||| | || ||||| || || |||||||| ||| || ||||| |||
Sbjct 3677 CAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCATC 3618
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| ||||| || || || ||||||| |||||||||||||| || |||||||| |||||
Sbjct 3617 CTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGGGGGATGCCCTCTTTGTC 3558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433811365691200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |