Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq3244 98.7 9e-16 >seq3244 Length=4747 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| || | | || ||||| ||| | || ||||| || || |||||||| ||| | Sbjct 3239 CCTCCTCGCAGGCGCAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 3180 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| |||||| ||||| || || || |||||||||||||||||||||| || Sbjct 3179 AGCGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGATCGGGGGGG 3120 Query 118632 ATGCCCTCCTTGTC 118645 ||||| || ||||| Sbjct 3119 ATGCCTTCTTTGTC 3106 Score = 95.1 bits (104), Expect = 1e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||| ||| | || ||||| || || |||||||| ||| || ||||| ||| Sbjct 3677 CAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCATC 3618 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || || || ||||||| |||||||||||||| || |||||||| ||||| Sbjct 3617 CTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGGGGGATGCCCTCTTTGTC 3558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433811365691200