Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3285 84.2 5e-11 >seq3285 Length=63365 Score = 84.2 bits (92), Expect = 5e-11 Identities = 103/139 (74%), Gaps = 5/139 (4%) Strand=Plus/Minus Query 157615 CTGCCGCTTCTTCAGCCAGTAGATGGCGCAGAACGACCCACTGAACTGCACGCCCTCCAG 157674 ||||||||||||||||||| |||| | |||||| || ||| ||| || | |||||||| Sbjct 18856 CTGCCGCTTCTTCAGCCAGAAGATCGAGCAGAAAGAGCCAGAGAAGTGGATGCCCTCCAC 18797 Query 157675 ACAGGTGAAGCCGACTAGCCTCTCCGCGAGTGAAGCGGTTTCGGGGTTC-ATCCACTTCT 157733 ||| | | || |||| |||| ||| || |||| | | | | || ||||||||| Sbjct 18796 ACACGCGTAGGCGACAAGCCGCTCTGC----AAAGCAGCTGCTGCTCTCTATCCACTTCA 18741 Query 157734 CTGCCCAGAGCGCCTTCTT 157752 ||||| |||||||||| Sbjct 18740 TCGCCCACTGCGCCTTCTT 18722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073716872524800