Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq326 89.7 5e-13 seq538 82.4 7e-11 >seq326 Length=80286 Score = 89.7 bits (98), Expect = 5e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222 || ||||||| ||| ||||||| |||||||| || | ||| || | || ||| | | Sbjct 56361 CCTGTCTTCAATCCCTTCTTCCAGGCGTAAAAGTGCAGCGATGTGAGCTTGCCAAAGTTG 56420 Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGC 22281 || | ||||| ||||||||||||||| ||||| || ||||||||||| ||||| || Sbjct 56421 GGGTCGCTCATGTGCACATTGAACGACTGGCTCTGGTCAATAAACGCTCCACGATCTGC 56479 >seq538 Length=19016 Score = 82.4 bits (90), Expect = 7e-11 Identities = 123/172 (72%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 57963 TTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT- 58021 ||| | ||| | || || ||||| || ||| || || || ||||| || ||| ||| Sbjct 16712 TTCTCAGAGCGCCTGATTGCGTTTGCTTGCGTGGAGGGCATCTTCTTCTCCGGCTCCTTC 16771 Query 58022 TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGA 58081 ||| || | || ||| | ||||| || || || ||||||||||| || ||| ||||| Sbjct 16772 TGCTCCA-TCTTCTGGCTCAAGAAGCGAGGGCTCATGCCCGGCCTCACCTTTTCAAACGA 16830 Query 58082 GTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTAC 58133 | | || || || ||||| || || || || || ||||| ||||| ||||| Sbjct 16831 GCTCATTTCTCGTGACGAAGGCCTGCACACAGACTTTGCATGCCTGCTGTAC 16882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445746340512000