Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq326 89.7 5e-13
seq538 82.4 7e-11
>seq326
Length=80286
Score = 89.7 bits (98), Expect = 5e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222
|| ||||||| ||| ||||||| |||||||| || | ||| || | || ||| | |
Sbjct 56361 CCTGTCTTCAATCCCTTCTTCCAGGCGTAAAAGTGCAGCGATGTGAGCTTGCCAAAGTTG 56420
Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGC 22281
|| | ||||| ||||||||||||||| ||||| || ||||||||||| ||||| ||
Sbjct 56421 GGGTCGCTCATGTGCACATTGAACGACTGGCTCTGGTCAATAAACGCTCCACGATCTGC 56479
>seq538
Length=19016
Score = 82.4 bits (90), Expect = 7e-11
Identities = 123/172 (72%), Gaps = 2/172 (1%)
Strand=Plus/Plus
Query 57963 TTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT- 58021
||| | ||| | || || ||||| || ||| || || || ||||| || ||| |||
Sbjct 16712 TTCTCAGAGCGCCTGATTGCGTTTGCTTGCGTGGAGGGCATCTTCTTCTCCGGCTCCTTC 16771
Query 58022 TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGA 58081
||| || | || ||| | ||||| || || || ||||||||||| || ||| |||||
Sbjct 16772 TGCTCCA-TCTTCTGGCTCAAGAAGCGAGGGCTCATGCCCGGCCTCACCTTTTCAAACGA 16830
Query 58082 GTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTAC 58133
| | || || || ||||| || || || || || ||||| ||||| |||||
Sbjct 16831 GCTCATTTCTCGTGACGAAGGCCTGCACACAGACTTTGCATGCCTGCTGTAC 16882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445746340512000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |