Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq538 93.3 6e-14 >seq538 Length=19016 Score = 93.3 bits (102), Expect = 6e-14 Identities = 100/130 (77%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 125444 CGTAGAGGGCATCTTCTTTTCGGG-TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCG 125502 ||| |||||||||||||| || || | || ||| ||||||| |||||||||||||| | Sbjct 16741 CGTGGAGGGCATCTTCTTCTCCGGCTCCTTCTGCT-CCATCTTCTGGCTCAAGAAGCGAG 16799 Query 125503 GACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACT 125562 | ||||||||||| || || |||||| | || ||||| ||||| ||||| ||| Sbjct 16800 GGCTCATGCCCGGCCTCACCTTTTCAAACGAGCTCATTTCTCGTGACGAAGGCCTGCACA 16859 Query 125563 GTGACTTTGC 125572 |||||||| Sbjct 16860 CAGACTTTGC 16869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741025852336000