Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_006820.1
Length=196280
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 648 0.0
seq112 87.8 2e-12
>seq2029
Length=64692
Score = 648 bits (718), Expect = 0.0
Identities = 752/1014 (74%), Gaps = 0/1014 (0%)
Strand=Plus/Minus
Query 137864 GTTCGATGTCTTGGATGACTGGATTAAACGAGATCGCTTTGTATTTGTGGGTTGGTCTGG 137923
||| ||||| | ||||||||| || || || || || || ||||| || ||||| ||
Sbjct 63379 GTTTGATGTTGTTGATGACTGGCTTCGTCGCGACCGTTTCGTTTTTGTAGGATGGTCAGG 63320
Query 137924 ACTACTACTTTTTCCCACTGCTTATTTGGCCCTTGGTGGCTGGCTTACTGGCACAACGTT 137983
|||| | || || ||||| ||| | || |||||||| ||| |||| || || || ||
Sbjct 63319 GTTACTTTTATTCCCGACTGCATATCTTGCACTTGGTGGTTGGTTTACAGGAACTACATT 63260
Query 137984 TGTTACAAGCTGGTACACCCACGGGTTGGCGTCTAGTTATCTTGAAGGCGCTAATTTCCT 138043
||| || ||||| || || || || || || ||| | |||||| ||||||| |
Sbjct 63259 TGTAACTTCTTGGTATACTCATGGTTTAGCTACTTCATATTTAGAAGGCTGTAATTTCTT 63200
Query 138044 CACAGCAGCTGTTTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 138103
|| || || ||||| ||||| || || ||||||||||||| | | | ||||||||
Sbjct 63199 AACTGCTGCGGTTTCTACTCCAGCAAATAGTATGGGTCATTCTTTATTATTTCTTTGGGG 63140
Query 138104 TCCTGAGTCTCAAGGAGATATCGTCCGCTGGTTCCAACTTGGGGGACTCTGGACTTTTGT 138163
|| || ||||||| ||| | || |||| ||||||||| || || |||||||| ||
Sbjct 63139 CCCAGAAGCTCAAGGTGATTTTACTCGTTGGTGCCAACTTGGAGGTCTTTGGACTTTCGT 63080
Query 138164 GGCGCTCCACGGGGCCTTTAGTCTGATTGGATTCATGCTTCGCCAGTTTGAGATCTCTCG 138223
|| || ||||| | ||| |||||||| || |||||||| || ||||| || ||||
Sbjct 63079 AGCCCTTCACGGTTCTTTTTCACTGATTGGTTTTATGCTTCGTCAATTTGAAATTGCTCG 63020
Query 138224 TCTGGTAGGCATCCGTCCCTACAACGCAATCGCATTCTCTGGTCCCATCGCTGTGTTCGT 138283
| ||| || ||||| || ||||| || || || |||| ||| || |||| |||||
Sbjct 63019 TTCAGTAAAAATTCGTCCATATAACGCGATTGCTTTTTCTGCTCCAATTTCTGTTTTCGT 62960
Query 138284 CAGCGTGTTCCTGATGTATCCTTTGGGTCAATCCAGTTGGTTCTTTGCTCCCTCCTTTGG 138343
|||||||| || || || || |||||||| ||||||||||||| || |||||
Sbjct 62959 TTCTGTGTTCCTAATTTACCCATTAGGTCAATCAGGTTGGTTCTTTGCACCAAGTTTTGG 62900
Query 138344 TGTGGCAGCAATCTTCCGATTCCTGTTGTTCCTTCAGGGTTTCCATAACTGGACCCTCAA 138403
||| || ||||| ||||| || | || || |||| || |||||||||||||| | ||
Sbjct 62899 TGTTGCGGCAATTTTCCGTTTTATCTTATTTTTTCAAGGCTTCCATAACTGGACTTTAAA 62840
Query 138404 CCCCTTTCATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTGCTCTGTGCTATTCA 138463
||| || ||||||||||| ||||| ||| | || || | ||| | || || || |||||
Sbjct 62839 CCCTTTCCATATGATGGGTGTAGCTGGTGTACTAGGAGCTGCGTTACTTTGCGCCATTCA 62780
Query 138464 TGGTGCTACAGTAGAAAATACTTTGTATGAAGATGGCGAACAATCAAATACTTTTAAAGC 138523
||||||||| |||||||| || | | ||||||||| || |||| || || ||
Sbjct 62779 TGGTGCTACTGTAGAAAACACACTTTTTGAAGATGGTGATGGTGCAAACACATTCCGTGC 62720
Query 138524 ATTTGAACCTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCTAACCGTTACTGGTC 138583
||| | || ||||||| ||||||||| || || ||||| ||||||||| | | |||||
Sbjct 62719 GTTTAACCCAACTCAAGCAGAAGAAACATACTCTATGGTAACTGCTAACAGATTTTGGTC 62660
Query 138584 GCAAATCTTTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGT 138643
||||||||||| | |||||| |||||| |||||| | |||||||||||||| |||||
Sbjct 62659 TCAAATCTTTGGTGTAGCTTTTTCTAATAAACGTTGGTTACACTTCTTTATGCTTTTTGT 62600
Query 138644 TCCCGTCATGGGTCTCTGGACTAGTAGTATTGGTATTATTGGTCTTGCTCTTAACCTACG 138703
||| || | || || |||| ||| ||||||| | | ||||| ||| | ||| ||||
Sbjct 62599 TCCTGTAACAGGGCTTTGGATGAGTGCTATTGGTGTAGTAGGTCTAGCTTTAAACTTACG 62540
Query 138704 AGCGTATGATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGATCCTGAATTCGAGACCTT 138763
|| || |||||||| || ||||||||||| || ||||||||||| ||||| || || ||
Sbjct 62539 TGCTTACGATTTCGTTTCACAAGAAATTCGCGCTGCAGAAGATCCAGAATTTGAAACTTT 62480
Query 138764 CTACACCAAGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGGATGGCTCCTGTGGATCA 138823
||| ||||| || || ||| | || |||||| | ||||| ||||||||| || |||||
Sbjct 62479 CTATACCAAAAATATCCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCA 62420
Query 138824 ACCTCACGAAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 138877
||||| ||||| |||| || ||||| || || || ||| | || ||||||||
Sbjct 62419 GCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGCTCT 62366
Score = 363 bits (402), Expect = 2e-95
Identities = 397/525 (76%), Gaps = 2/525 (0%)
Strand=Plus/Minus
Query 135374 TTCTGCGAGTGGGTTACCAGCACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTG 135433
|| || ||||||||||| ||||| || ||||| | || | ||||||||||| |
Sbjct 32746 TTTTGTGAGTGGGTTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATTA 32687
Query 135434 ATGATTCCTACTCTTCTCGCAGCTGCTATCTGC-TTTATTGTTGCTTTCATCGCTGCACC 135492
|||||||||||| | | | || || || | ||||| | ||||| ||||| |||||
Sbjct 32686 ATGATTCCTACTTTATTAACTGCAACT-TCAGTGTTTATCATCGCTTTTATCGCAGCACC 32628
Query 135493 TCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATAA 135552
||| || ||||| || || ||||| || || ||| ||||||| || | |||||||| ||
Sbjct 32627 TCCTGTTGATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCACTTTTATACGGAAACAA 32568
Query 135553 CATCATCTCTGGTGCTGTTATCCCTTCTAGCAACGCCATCGGCCTTCACTTCTATCCCAT 135612
|||||| ||||||||| |||| ||| || ||||| ||||| | || ||||| || ||
Sbjct 32567 CATCATTTCTGGTGCTATTATTCCTACTTCTAACGCAATCGGTTTACATTTCTACCCTAT 32508
Query 135613 CTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATCAACTAGTGGT 135672
|||||||| ||||||||||| || ||| |||| || ||||||||||| ||||| | ||
Sbjct 32507 TTGGGAAGCAGCTTCTCTTGACGAATGGTTATACAACGGTGGTCCTTACCAACTTATCGT 32448
Query 135673 CTTCCACTTCCTTATCGGTGTCTTCTCTTACATGGGTCGCGAGTGGGAACTCTCTTACCG 135732
| || ||| | | || ||| |||||||||||||| ||||||||| | |||| |||
Sbjct 32447 TTGTCATTTCTTCTTAGGAATCTGTTCTTACATGGGTCGTGAGTGGGAATTATCTTTCCG 32388
Query 135733 ACTGGGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTACTGC 135792
| |||||||| || |||||| || ||||||||||| || ||||| || || || ||
Sbjct 32387 TTTAGGTATGCGTCCATGGATTGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCAACAGC 32328
Query 135793 TGTTTTCCTGGTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGCAT 135852
||| ||| | ||||||| | || |||||||||||| |||||||||||| | || ||
Sbjct 32327 TGTATTCATCATCTACCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTAT 32268
Query 135853 TTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACAA 135897
|||||| || ||||||| |||| | || ||||| || || || ||
Sbjct 32267 TTCTGGTACATTTAACTTCATGATCGTATTCCAAGCTGAGCATAA 32223
Score = 347 bits (384), Expect = 2e-90
Identities = 336/432 (78%), Gaps = 0/432 (0%)
Strand=Plus/Minus
Query 135896 AACATTCTCATGCATCCTTTCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTG 135955
|||||||| ||||| || ||||| ||| | || ||||| || || || |||||||| |
Sbjct 31300 AACATTCTAATGCACCCATTCCATATGCTAGGCGTTGCCGGTGTATTTGGTGGTTCATTA 31241
Query 135956 TTCTCTGCTATGCATGGATCTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAGGTA 136015
|||||||||||||| || || ||||| || ||| ||| | ||||| || ||||||
Sbjct 31240 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTCTAATTCGTGAAACAACTGAGAAC 31181
Query 136016 GAATCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCT 136075
||||| ||| | |||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct 31180 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 31121
Query 136076 GCTCATGGTTACTTCGGTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCG 136135
|||||||| |||||||||||| | || |||||||| || || || ||||||||||||||
Sbjct 31120 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATACGCTTCTTTTAACAACTCTCGTTCA 31061
Query 136136 CTACACTTTTTCCTTGCTGCTTGGCCTGTTGTCGGTATCTGGTTTGCTGCCCTGGGCGTA 136195
|||| || ||| | ||||||||||| ||||| ||||| |||||| |||| | || |
Sbjct 31060 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTTACTGCTTTAGGTATT 31001
Query 136196 TCTACGATGGCGTTCAACCTCAATGGATTCAACTTCAACCAGTCCATTGTATCTTCTGAA 136255
|| || ||||| |||||| | ||||| |||||||||||||| || ||||| ||| ||
Sbjct 31000 TCAACTATGGCTTTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 30941
Query 136256 GGTCGTGTACTCAACACCTGGGCAGATGTGCTGAATCGTGCTGGTCTGGGTATGGAGGTG 136315
|| ||||| | ||||| ||||| || | | || ||||| || |||||||| ||
Sbjct 30940 GGCCGTGTTATTAACACTTGGGCTGACATTATCAACCGTGCCAACCTTGGTATGGAAGTA 30881
Query 136316 ATGCACGAGCGT 136327
||||| ||||||
Sbjct 30880 ATGCATGAGCGT 30869
>seq112
Length=44222
Score = 87.8 bits (96), Expect = 2e-12
Identities = 53/56 (95%), Gaps = 0/56 (0%)
Strand=Plus/Minus
Query 119469 GTCGCCAAGTGGTAAGGCAGCGGGTTTTGGTCCCGCCATTCGTGGGTTCGAATCCT 119524
||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct 26683 GTCGCCAAGTGGTAAGGCAGCGGGTTTTGATCCCGCCATTCGGAGGTTCGAATCCT 26628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627939741440000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |