Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_008296.2
Length=177300
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 664 0.0
>seq2029
Length=64692
Score = 664 bits (736), Expect = 0.0
Identities = 758/1015 (75%), Gaps = 2/1015 (0%)
Strand=Plus/Minus
Query 167299 GTTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGG 167358
||||||||| | |||||||||||| |||||||| || || ||||| || ||||| ||
Sbjct 63379 GTTTGATGTTGTTGATGACTGGCTTCGTCGCGACCGTTTCGTTTTTGTAGGATGGTCAGG 63320
Query 167359 ATTACTTCTTTTTCCCACTGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCACGACGTT 167418
|||||| | || || ||||| ||||| ||| ||||||| ||| |||| || || || ||
Sbjct 63319 GTTACTTTTATTCCCGACTGCATATCTTGCACTTGGTGGTTGGTTTACAGGAACTACATT 63260
Query 167419 TGTTACGAGCTGGTATACCCACGGGTTGGCGTCTAGTTACCTTGAGGGTGCTAATTTTCT 167478
||| || |||||||| || || || || || || | || || |||||| |
Sbjct 63259 TGTAACTTCTTGGTATACTCATGGTTTAGCTACTTCATATTTAGAAGGCTGTAATTTCTT 63200
Query 167479 CACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 167538
|| || || || || ||||| || | ||||||||||||| | | | ||||||||
Sbjct 63199 AACTGCTGCGGTTTCTACTCCAGCAAATAGTATGGGTCATTCTTTATTATTTCTTTGGGG 63140
Query 167539 TCCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGCTTTTGT 167598
|| || |||| || ||||| | | |||||||| ||||| || || ||| |||| ||
Sbjct 63139 CCCAGAAGCTCAAGGTGATTTTACTCGTTGGTGCCAACTTGGAGGTCTTTGGACTTTCGT 63080
Query 167599 GGCGCTCCACGGAGCCTTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGATAAGTAG 167658
|| || ||||| | ||| | || || || ||||||||||| |||||||| || | |
Sbjct 63079 AGCCCTTCACGGTTCTTTTTCACTGATTGGTTTTATGCTTCGTCAATTTGAAATTGCTCG 63020
Query 167659 ACTAGTAGGTATCCGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCTTTGT 167718
|||| || ||||| || || |||||||||||||||| ||| ||| |||| || ||
Sbjct 63019 TTCAGTAAAAATTCGTCCATATAACGCGATTGCTTTTTCTGCTCCAATTTCTGTTTTCGT 62960
Query 167719 GTCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGTTTGG 167778
||||| || || || || || | || || || |||||||||||||||| |||||
Sbjct 62959 TTCTGTGTTCCTAATTTACCCATTAGGTCAATCAGGTTGGTTCTTTGCACCAAGTTTTGG 62900
Query 167779 TGTTGCAGCGATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGACGCTCAA 167838
|||||| || || || | || | |||| | || || |||||||||||||| | ||
Sbjct 62899 TGTTGCGGCAATTTTCCGTTTTATCTTATTTTTTCAAGGCTTCCATAACTGGACTTTAAA 62840
Query 167839 CCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAATCCA 167898
|||||||||||||||||| || |||||| | ||||| | ||| || |||| || || ||
Sbjct 62839 CCCTTTCCATATGATGGGTGTAGCTGGTGTACTAGGAGCTGCGTTACTTTGCGCCATTCA 62780
Query 167899 TGGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCAAAGC 167958
||||| ||| ||||| || || || | |||||||||||| |||||||| ||| ||
Sbjct 62779 TGGTGCTACTGTAGAAAACACACTTTTTGAAGATGGTGATGGTGCAAACACATTCCGTGC 62720
Query 167959 ATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTGGTC 168018
||| | | ||||| | ||| ||||| || || ||||| ||||||||| |||| |||||
Sbjct 62719 GTTTAACCCAACTCAAGCAGAAGAAACATACTCTATGGTAACTGCTAACAGATTTTGGTC 62660
Query 168019 TCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTTCGT 168078
|||||| |||||| | ||||| ||||| |||||||| ||||||||||||||||| ||
Sbjct 62659 TCAAATCTTTGGTGTAGCTTTTTCTAATAAACGTTGGTTACACTTCTTTATGCTTTTTGT 62600
Query 168079 TCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCTT-C 168137
|||||| | || ||||||| ||| |||||||| | | ||||| || |||| ||| |
Sbjct 62599 TCCTGTAACAGGGCTTTGGATGAGTGCTATTGGTGTAGTAGGTCTAGCT-TTAAACTTAC 62541
Query 168138 GTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAACTT 168197
||||||| || || || || || ||| || | || ||||| |||||||| ||||||||||
Sbjct 62540 GTGCTTACGATTTCGTTTCACAAGAAATTCGCGCTGCAGAAGATCCAGAATTTGAAACTT 62481
Query 168198 TCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGACC 168257
||||||| ||||| ||||| | || ||||| | ||||| ||||||||| | ||| |
Sbjct 62480 TCTATACCAAAAATATCCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATC 62421
Query 168258 AACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312
| || |||||||| |||||||||| || || || || ||| | || ||||||||
Sbjct 62420 AGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGCTCT 62366
Score = 370 bits (410), Expect = 1e-97
Identities = 364/470 (77%), Gaps = 0/470 (0%)
Strand=Plus/Minus
Query 166576 AACATCCTCATGCACCCCTTCCATATGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTT 166635
||||| || |||||||| ||||||||||| || || || |||||||| ||||| ||| |
Sbjct 31300 AACATTCTAATGCACCCATTCCATATGCTAGGCGTTGCCGGTGTATTTGGTGGTTCATTA 31241
Query 166636 TTCTCGGCAATGCACGGCAGTCTCGTTACTTCCTCGCTCGTCCGTGAGACCACTGAAACT 166695
||||| || |||||||| || || ||||| || || | ||||| || ||||| |
Sbjct 31240 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTCTAATTCGTGAAACAACTGAGAAC 31181
Query 166696 GAGTCTCAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTGGCT 166755
|| || ||| | |||||||| || |||||||||||||| || ||||||||||| ||
Sbjct 31180 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 31121
Query 166756 GCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCTCGCTCG 166815
|||||||| ||||||||||| | || |||||||||||||| || ||||||||||| ||
Sbjct 31120 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATACGCTTCTTTTAACAACTCTCGTTCA 31061
Query 166816 CTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTT 166875
| || |||||| | || || ||||| ||||| ||||| |||||||||||| | ||| ||
Sbjct 31060 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTTACTGCTTTAGGTATT 31001
Query 166876 AGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAG 166935
|| ||||| |||||| | || ||||||||||||||||| || | | ||| ||
Sbjct 31000 TCAACTATGGCTTTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 30941
Query 166936 GGTCGTGTGCTCAACACTTGGGCAGATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTA 166995
|| ||||| | ||||||||||| || | |||||||||| || ||||||||||||
Sbjct 30940 GGCCGTGTTATTAACACTTGGGCTGACATTATCAACCGTGCCAACCTTGGTATGGAAGTA 30881
Query 166996 ATGCACGAGCGTAATGCTCACAACTTCCCTCTGGATCTTGCTGCTGCTGA 167045
||||| |||||||| |||||||||||||| | ||| | || | || |||
Sbjct 30880 ATGCATGAGCGTAACGCTCACAACTTCCCGTTAGATTTAGCGGTTGTTGA 30831
Score = 358 bits (396), Expect = 8e-94
Identities = 396/525 (75%), Gaps = 2/525 (0%)
Strand=Plus/Minus
Query 166054 TTCTGCGAATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACTG 166113
|| || || |||||||| || | |||||| | || | ||||||||||| | |
Sbjct 32746 TTTTGTGAGTGGGTTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATTA 32687
Query 166114 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCACC 166172
|||||||| ||| | || | ||||| || || || ||| ||||||| | || |||||
Sbjct 32686 ATGATTCCTACTTTATTAACTGCAACT-TCAGTGTTTATCATCGCTTTTATCGCAGCACC 32628
Query 166173 TCCTGTCGATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACAA 166232
|||||| ||||||||||| ||||||||||| || | || || || | || || |||||
Sbjct 32627 TCCTGTTGATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCACTTTTATACGGAAACAA 32568
Query 166233 CATCATCTCTGGTGCTGTTGTCCCCTCCTCCAACGCAATTGGTCTTCACTTCTATCCCAT 166292
|||||| ||||||||| || | || | || |||||||| ||| | || ||||| || ||
Sbjct 32567 CATCATTTCTGGTGCTATTATTCCTACTTCTAACGCAATCGGTTTACATTTCTACCCTAT 32508
Query 166293 CTGGGAAGCAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGTAGT 166352
||||||||||| || ||||| |||||| | || ||||||||||||| ||| || | ||
Sbjct 32507 TTGGGAAGCAGCTTCTCTTGACGAATGGTTATACAACGGTGGTCCTTACCAACTTATCGT 32448
Query 166353 CTTCCACTTCCTCATCGGCATCTATGCCTACATGGGTCGTGAATGGGAATTGTCTTACCG 166412
| || ||| || | || |||| | | |||||||||||||| |||||||| |||| |||
Sbjct 32447 TTGTCATTTCTTCTTAGGAATCTGTTCTTACATGGGTCGTGAGTGGGAATTATCTTTCCG 32388
Query 166413 CCTCGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGC 166472
| ||||||||||| |||||| || || ||||| ||||| ||||| |||||| | ||
Sbjct 32387 TTTAGGTATGCGTCCATGGATTGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCAACAGC 32328
Query 166473 AGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGGTAT 166532
|| ||| | |||| || |||||||||||||||||||||| | ||||| | |||||
Sbjct 32327 TGTATTCATCATCTACCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTAT 32268
Query 166533 CAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAA 166577
||| || || |||| |||| | || |||||||| ||||| ||
Sbjct 32267 TTCTGGTACATTTAACTTCATGATCGTATTCCAAGCTGAGCATAA 32223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 567206474560000
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