Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq3285 116 4e-21
seq538 113 5e-20
seq326 86.0 7e-12
>seq3285
Length=63365
Score = 116 bits (128), Expect = 4e-21
Identities = 118/152 (78%), Gaps = 5/152 (3%)
Strand=Plus/Minus
Query 126104 CCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAG 126163
|| |||||||| ||||||||||| |||||| |||| || || || || |||||| |
Sbjct 18867 CCAGGCATGAGCTGCCGCTTCTTCAGCCAGAAGATCGAGCAGAAAGAGCCAGAGAAGTGG 18808
Query 126164 ATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGC-GCGACTTTGTGTC 126222
|| ||||||||||||||| | || | || ||||| |||||| ||| || | | ||
Sbjct 18807 ATGCCCTCCACACACGCGTAGGCGACAAGCCGCTCTGCAAAGCAGCTGC----TGCTCTC 18752
Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCT 126254
| |||||||||||||||||||||||| ||||
Sbjct 18751 TATCCACTTCATCGCCCACTGCGCCTTCTTCT 18720
>seq538
Length=19016
Score = 113 bits (124), Expect = 5e-20
Identities = 116/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106
||||| ||| ||| || || |||||||| || ||||| || || || ||| || ||
Sbjct 16869 GCAAAGTCTGTGTGCAGGCCTTCGTCACGAGAAATGAGCTCGTTTGAAAAGGTGAGGCCG 16810
Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166
|||||||| || |||||||| | |||||| || | || || || || |||||||||||
Sbjct 16809 GGCATGAGCCCTCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAGATG 16750
Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTC 126198
|||||||| || || ||||||| || |||||
Sbjct 16749 CCCTCCACGCAAGCAAACGCAATCAGGCGCTC 16718
>seq326
Length=80286
Score = 86.0 bits (94), Expect = 7e-12
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 113941 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGA 114000
|||||| || | ||||| |||||||||||||| ||||| |||| ||| ||| ||||
Sbjct 57207 ATAGATGTTTGATGTGTAAGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGGCTGGTGCT 57266
Query 114001 GGCTGTGGGCATGGGTGCCATGAGAAG 114027
||| |||||||||||||||| ||| ||
Sbjct 57267 GGCGGTGGGCATGGGTGCCACGAGCAG 57293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597326719088000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |