Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq326 98.7 1e-15 >seq326 Length=80286 Score = 98.7 bits (108), Expect = 1e-15 Identities = 175/250 (70%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 94333 TGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGCGTTTT 94392 ||||| || || || ||||| || ||||| ||| ||||| || || | ||| Sbjct 58859 TGGAGCCTGTTCTGCCCCAACGAGGCACCCGGGCTGGCCGACTGCTGGGGCCCCGAGTTT 58800 Query 94393 GAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGGCCAGGAAGGTTATGGATGCTAG 94451 || | | ||||||| ||||| | || ||||| |||| | ||||| || | || Sbjct 58799 GAGGCCCTGTATGCCAAGTACGAGAGCG-AGGGCCGGGCCCGCAAGGTCATCAAGGCGCA 58741 Query 94452 GAAGCTGTGGGAT-CAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTGT 94510 | |||||||| | ||| | |||| | |||||||||||||| | |||| ||| | | Sbjct 58740 GCAGCTGTGGTTTGCAGTGC-TGGAGGCCCAGGTGGAGACGGGCAACCCCTTCATGCTTT 58682 Query 94511 TCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGA 94570 ||||||||||| |||| |||||||||||||||| || | || |||||| || | Sbjct 58681 ACAAGGACTCTGCCAACCGCAAGTCCAACCAGCAGAACTTGGGCACCATCAAGTCGTCCA 58622 Query 94571 ATCTGTGCAC 94580 | |||||||| Sbjct 58621 ACCTGTGCAC 58612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494700937456000