Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq3244 104 6e-17
seq3190 93.3 1e-13
seq3143 87.8 4e-12
>seq3244
Length=4747
Score = 104 bits (114), Expect = 6e-17
Identities = 104/135 (77%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
||| || | ||| || ||||| | || |||||||| |||| ||||||||| |||| ||
Sbjct 3234 TCGCAGGCGCAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGT 3175
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| ||||| ||||||||||| || || ||||||||||||||||| || || || ||
Sbjct 3174 GCGGCCATCCTCCAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGATCGGGGGGGATGCC 3115
Query 199528 TTCTCGCTCCTGAAT 199542
|||| ||||||||
Sbjct 3114 TTCTTTGTCCTGAAT 3100
Score = 96.9 bits (106), Expect = 8e-15
Identities = 88/111 (79%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
||| || | ||| || ||||| | || |||||||| |||| ||||||||| |||| ||
Sbjct 3686 TCGCAGGCGCAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGT 3627
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
| ||||| ||||||||||| ||||| |||||||| |||||||| || ||
Sbjct 3626 GCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGG 3576
>seq3190
Length=33988
Score = 93.3 bits (102), Expect = 1e-13
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
||| || | ||| || ||||| || || |||||||| |||| |||||| ||||||| ||
Sbjct 17047 TCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCAGCCAGCGT 16988
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
| ||||| || |||||||| || || ||||| || ||||||||||| ||
Sbjct 16987 GCGGCCATCCTCAAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGG 16937
>seq3143
Length=13185
Score = 87.8 bits (96), Expect = 4e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 199421 ACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCC 199480
|| ||||| || || |||||||| |||| ||||||||| |||| || | || || |||
Sbjct 7103 ACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGTGTGCGGCCGTCCTCC 7044
Query 199481 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
|||||||| || || ||||| || ||||||||||| ||
Sbjct 7043 AGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGG 7006
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178867222241200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |