Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq3244 84.2 2e-11
>seq3244
Length=4747
Score = 84.2 bits (92), Expect = 2e-11
Identities = 104/141 (74%), Gaps = 1/141 (1%)
Strand=Plus/Minus
Query 39486 ATCATCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATA 39545
||||| ||||||||||| ||||| |||| ||||| ||| || || || || || ||
Sbjct 3697 ATCAT-GCCGCCTCGCAGGCGCAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTA 3639
Query 39546 ATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATC 39605
||||||| ||| |||| |||| || || ||| |||| || | |||||||||||
Sbjct 3638 GTCGGCCAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATC 3579
Query 39606 CGAGGGTACGCCTTCTTTGTC 39626
| ||| | ||| ||||||||
Sbjct 3578 GGGGGGGATGCCCTCTTTGTC 3558
Score = 82.4 bits (90), Expect = 5e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| ||||||| ||||| |||| ||||| ||| || || || || || || |||||
Sbjct 3240 GCCTCCTCGCAGGCGCAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGC 3181
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
|| ||| |||| |||| || || || |||| || | |||||||||||| | |||
Sbjct 3180 CAGCGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGATCGGGGGG 3121
Query 39612 TACGCCTTCTTTGTC 39626
| ||||||||||||
Sbjct 3120 GATGCCTTCTTTGTC 3106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347354359158800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |