Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq161 86.0 5e-11 >seq161 Length=11266 Score = 86.0 bits (94), Expect = 5e-11 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 518513 CGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCT 518572 || ||||||||||||| ||| ||| | || || || || | || | ||||| ||||| Sbjct 3117 CGCTTTGCATCAAAAACAGTGTTGATGGGGTTCATCGCTACCTGGTTCTTGGCGGCATCG 3058 Query 518573 CCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGA 518632 ||||| || | || || || || |||| || ||||| ||||| ||||| || || || Sbjct 3057 CCAATTAGGCGCTCGGTGTCGGTGAATGCCACGTATGAGGGAGTGGTGCGGTTGCCCTGC 2998 Query 518633 TCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACT 518682 || || | ||| ||||| || | ||| ||||| | ||| || || || Sbjct 2997 TCGTTTGGAATGATTTCCACGCGATCATGCTGCCACAGACCAACGCAGCT 2948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780643756141600