Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq538 123 3e-23
seq3285 91.5 2e-13
>seq538
Length=19016
Score = 123 bits (136), Expect = 3e-23
Identities = 122/158 (77%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333
||||| || ||| || || || || || ||||| || || ||||| ||| |||||
Sbjct 16869 GCAAAGTCTGTGTGCAGGCCTTCGTCACGAGAAATGAGCTCGTTTGAAAAGGTGAGGCCG 16810
Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393
|||||||| || |||||||| | ||| | || | |||||| || ||||||||||||||
Sbjct 16809 GGCATGAGCCCTCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAGATG 16750
Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAA 117431
|||||||| || |||||||||| |||||||| | |||
Sbjct 16749 CCCTCCACGCAAGCAAACGCAATCAGGCGCTCTGAGAA 16712
>seq3285
Length=63365
Score = 91.5 bits (100), Expect = 2e-13
Identities = 111/151 (74%), Gaps = 3/151 (2%)
Strand=Plus/Minus
Query 117331 CCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAG 117390
|| |||||||| ||||||||||| ||| | || | |||||| || || |||||| |
Sbjct 18867 CCAGGCATGAGCTGCCGCTTCTTCAGCCAGAAGATCGAGCAGAAAGAGCCAGAGAAGTGG 18808
Query 117391 ATACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA 117450
|| |||||||||||||| | || | ||| ||||| || ||| ||| | | ||
Sbjct 18807 ATGCCCTCCACACACGCGTAGGCGACAAGCCGCTCTGCAAAGCAGC---TGCTGCTCTCT 18751
Query 117451 AACCATTTCATTGCCCATTTCGCCTTCTTCT 117481
| ||| ||||| ||||| | |||||||||||
Sbjct 18750 ATCCACTTCATCGCCCACTGCGCCTTCTTCT 18720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589954250864000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |