Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_015281.1
Length=179563
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 535 5e-147
>seq2029
Length=64692
Score = 535 bits (592), Expect = 5e-147
Identities = 729/1015 (72%), Gaps = 2/1015 (0%)
Strand=Plus/Minus
Query 169306 GTTCGATGTTCTCGATGACTGGCTCAAACGCGACCGCTTTGTATTCATTGGTTGGTCTGG 169365
||| |||||| | ||||||||||| |||||||| || || || | || ||||| ||
Sbjct 63379 GTTTGATGTTGTTGATGACTGGCTTCGTCGCGACCGTTTCGTTTTTGTAGGATGGTCAGG 63320
Query 169366 TCTACTTCTTCTTCCC-ACTGCCTATCTTGCTATTGGAGGGTGGCTCACTGGTACAGCGT 169424
||||| || ||||| ||||| |||||||| |||| || ||| | || || || | |
Sbjct 63319 GTTACTT-TTATTCCCGACTGCATATCTTGCACTTGGTGGTTGGTTTACAGGAACTACAT 63261
Query 169425 TTGTTACTTCCTGGTACACCCACGGACTCGCTTCCAGTTACTTAGAAGGCGCTAACTTCC 169484
|||| ||||| ||||| || || || | ||| | || ||||||||| ||| |||
Sbjct 63260 TTGTAACTTCTTGGTATACTCATGGTTTAGCTACTTCATATTTAGAAGGCTGTAATTTCT 63201
Query 169485 TCACTGCTGCTGTCAGTACACCTGCTGACGCTATGGGACACTCACTGCTCTTGCTATGGG 169544
| |||||||| || ||| || || | |||||| || || | | || || ||||
Sbjct 63200 TAACTGCTGCGGTTTCTACTCCAGCAAATAGTATGGGTCATTCTTTATTATTTCTTTGGG 63141
Query 169545 GTCCAGAAGCACAAGGCGATTTCGTTCGCTGGTGTCAATTGGGTGGTCTCTGGAACTTTG 169604
| |||||||| ||||| ||||| ||| ||||| ||| | || ||||| |||| || |
Sbjct 63140 GCCCAGAAGCTCAAGGTGATTTTACTCGTTGGTGCCAACTTGGAGGTCTTTGGACTTTCG 63081
Query 169605 TAGCACTTCATGGTGCATTTGCATTGATTGGTTTCATGCTTAGGCAGTTTGAATTGGCAC 169664
|||| ||||| ||| | ||| || |||||||||| |||||| | || |||||| | || |
Sbjct 63080 TAGCCCTTCACGGTTCTTTTTCACTGATTGGTTTTATGCTTCGTCAATTTGAAATTGCTC 63021
Query 169665 GTCTTATTGGCATCCGTCCTTATAATGCTATTGCATTCTCTGGTCCTATTGCTGTATTTG 169724
|| | || ||||| ||||| || ||||| || |||| ||| ||| |||| || |
Sbjct 63020 GTTCAGTAAAAATTCGTCCATATAACGCGATTGCTTTTTCTGCTCCAATTTCTGTTTTCG 62961
Query 169725 TCAGTGTCTTTCTTATCTACCCACTTGGACAGTCCTCATGGTTCTTTGCTCCCTCCTTTG 169784
| ||| || || || |||||| | || || || ||||||||||| || ||||
Sbjct 62960 TTTCTGTGTTCCTAATTTACCCATTAGGTCAATCAGGTTGGTTCTTTGCACCAAGTTTTG 62901
Query 169785 GAGTATCAGCAATCTTCAGGTTCCTGTTGTTCCTGCAAGGATTCCACAACTGGACGTTGA 169844
| || | ||||| ||| | || | || || | ||||| ||||| |||||||| || |
Sbjct 62900 GTGTTGCGGCAATTTTCCGTTTTATCTTATTTTTTCAAGGCTTCCATAACTGGACTTTAA 62841
Query 169845 ATCCATTCCACATGATGGGTGTAGCAGGAATCTTGGGCGGAGCATTGCTTTCTGCTATCC 169904
| || ||||| |||||||||||||| || | | || | || || |||| || || |
Sbjct 62840 ACCCTTTCCATATGATGGGTGTAGCTGGTGTACTAGGAGCTGCGTTACTTTGCGCCATTC 62781
Query 169905 ATGGTGTTACAGTAGAGAACACATTGTATGAAGACGGTGAGCAGGCAAATACTTTCAAGG 169964
|||||| ||| ||||| |||||| | | |||||| ||||| ||||| || ||| |
Sbjct 62780 ATGGTGCTACTGTAGAAAACACACTTTTTGAAGATGGTGATGGTGCAAACACATTCCGTG 62721
Query 169965 CGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGT 170024
||||| | | || || | |||||| || || |||||||| ||||| ||| | || ||||
Sbjct 62720 CGTTTAACCCAACTCAAGCAGAAGAAACATACTCTATGGTAACTGCTAACAGATTTTGGT 62661
Query 170025 CGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGTTGGCTTCATTTTTTCATGTTGTTTG 170084
| || ||||| ||| | || |||||||| || |||||| | || || || ||| | ||||
Sbjct 62660 CTCAAATCTTTGGTGTAGCTTTTTCTAATAAACGTTGGTTACACTTCTTTATGCTTTTTG 62601
Query 170085 TGCCTGTTATGGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTC 170144
| ||||| | || ||||||| ||||||| | | || || ||| | || | |
Sbjct 62600 TTCCTGTAACAGGGCTTTGGATGAGTGCTATTGGTGTAGTAGGTCTAGCTTTAAACTTAC 62541
Query 170145 GTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCT 170204
|||||||||||||||| || || || | || |||||||||||||||||||| || |
Sbjct 62540 GTGCTTACGATTTCGTTTCACAAGAAATTCGCGCTGCAGAAGATCCAGAATTTGAAACTT 62481
Query 170205 TCTACACCAAAAACATCCTATTGAATGAAGGACTTCGTGCATGGTTGGCACCTGCTGATC 170264
|||| |||||||| ||||| || || ||||| ||||||| ||| |||| || ||||
Sbjct 62480 TCTATACCAAAAATATCCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATC 62421
Query 170265 AACCACATGAAAACTTCATCTTCCCAGAAGAAGTTCTTCCGAGAGGTAACGCACT 170319
| || |||||||| | | ||||| || || ||| | || | || ||||| ||
Sbjct 62420 AGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGCTCT 62366
Score = 369 bits (408), Expect = 4e-97
Identities = 399/526 (76%), Gaps = 2/526 (0%)
Strand=Plus/Minus
Query 167862 TTTCTGCGAGTGGGTAACATCAACTAACAACCGCCTCTATGTCGGTTGGTTCGGCGTACT 167921
||| || |||||||| || ||| | ||||| | || |||||||||| || ||| |
Sbjct 32747 TTTTTGTGAGTGGGTTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATT 32688
Query 167922 GATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 167980
|||||||| ||| | || | |||||| || || || ||| |||| || |||| || |
Sbjct 32687 AATGATTCCTACTTTATTAACTGCAACT-TCAGTGTTTATCATCGCTTTTATCGCAGCAC 32629
Query 167981 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACA 168040
| ||||| || ||||| || |||||||| || || |||||||||| | || || ||||
Sbjct 32628 CTCCTGTTGATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCACTTTTATACGGAAACA 32569
Query 168041 ACATCATCTCTGGTGCAGTTGTCCCTTCTTCTAATGCTATTGGACTTCACTTCTATCCCA 168100
||||||| |||||||| || | ||| ||||||| || || || | || ||||| || |
Sbjct 32568 ACATCATTTCTGGTGCTATTATTCCTACTTCTAACGCAATCGGTTTACATTTCTACCCTA 32509
Query 168101 TCTGGGAAGCAGCATCACTCGATGAGTGGTTGTATAACGGTGGTCCTTTCCAACTAGTAG 168160
| ||||||||||| || || || || ||||| || ||||||||||||| |||||| | |
Sbjct 32508 TTTGGGAAGCAGCTTCTCTTGACGAATGGTTATACAACGGTGGTCCTTACCAACTTATCG 32449
Query 168161 TCTTTCACTTCCTCATCGGTATCTATGCATACATGGGACGTGAATGGGAACTTTCATATC 168220
| | ||| ||| || | || |||| | | |||||||| ||||| |||||| | || | |
Sbjct 32448 TTTGTCATTTCTTCTTAGGAATCTGTTCTTACATGGGTCGTGAGTGGGAATTATCTTTCC 32389
Query 168221 GTTTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCAGCGAGTG 168280
|||||||||||||||||||||| ||||| ||||| |||||||| |||||||| | |
Sbjct 32388 GTTTAGGTATGCGTCCATGGATTGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCAACAG 32329
Query 168281 CAGTATTCCTAGTGTATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAA 168340
| |||||| | | || || ||||||||||| ||||||||||| ||||| | || |
Sbjct 32328 CTGTATTCATCATCTACCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTA 32269
Query 168341 TCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAA 168386
| || || ||||| |||| |||| | || |||||||||||||| ||
Sbjct 32268 TTTCTGGTACATTTAACTTCATGATCGTATTCCAAGCTGAGCATAA 32223
Score = 361 bits (400), Expect = 6e-95
Identities = 362/470 (77%), Gaps = 0/470 (0%)
Strand=Plus/Minus
Query 168385 AATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTG 168444
|| ||||| ||||| || ||||||||||| |||||||| || ||||||||||| ||
Sbjct 31300 AACATTCTAATGCACCCATTCCATATGCTAGGCGTTGCCGGTGTATTTGGTGGTTCATTA 31241
Query 168445 TTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACC 168504
|| |||||||||||| | || ||||||||||| || | || || ||||| | |
Sbjct 31240 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTCTAATTCGTGAAACAACTGAGAAC 31181
Query 168505 GAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCC 168564
||||| ||| | |||||||| ||||| |||||||||||||| ||||||||||| ||
Sbjct 31180 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 31121
Query 168565 GCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCC 168624
|||||||| |||||||||||||| || |||||||||||||| || |||||||| || ||
Sbjct 31120 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATACGCTTCTTTTAACAACTCTCGTTCA 31061
Query 168625 TTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTC 168684
|| || |||||| | ||||| ||||| ||||| || || ||||| || || | || |
Sbjct 31060 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTTACTGCTTTAGGTATT 31001
Query 168685 TCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAG 168744
|| || ||||| |||||| | || ||||||||||||||||| || | | ||| ||
Sbjct 31000 TCAACTATGGCTTTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 30941
Query 168745 GGTCGTGTGTTGAACACCTGGGCAGATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGTT 168804
|| ||||| | ||||| ||||| || || | ||||| || || |||||||||||
Sbjct 30940 GGCCGTGTTATTAACACTTGGGCTGACATTATCAACCGTGCCAACCTTGGTATGGAAGTA 30881
Query 168805 ATGCATGAGCGTAACGCACACAACTTCCCACTCGATCTTGCTGCTGCTGA 168854
||||||||||||||||| ||||||||||| | ||| | || | || |||
Sbjct 30880 ATGCATGAGCGTAACGCTCACAACTTCCCGTTAGATTTAGCGGTTGTTGA 30831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 574447748688000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |