Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_015282.1
Length=174079
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 648 0.0
>seq2029
Length=64692
Score = 648 bits (718), Expect = 0.0
Identities = 771/1038 (74%), Gaps = 7/1038 (1%)
Strand=Plus/Minus
Query 165193 GTTCGATGTCCTCGATGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGG 165252
||| ||||| | |||||||||||| || || |||||||||||||| || ||||| ||
Sbjct 63379 GTTTGATGTTGTTGATGACTGGCTTCGTCGCGACCGTTTCGTTTTTGTAGGATGGTCAGG 63320
Query 165253 ACTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTT 165312
| ||| | || || ||||| |||||||| |||| |||||| |||| || ||||| ||
Sbjct 63319 GTTACTTTTATTCCCGACTGCATATCTTGCACTTGGTGGTTGGTTTACAGGAACTACATT 63260
Query 165313 CGCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGG-TGCAAACTTTC 165371
| || |||||||||||| || || || | ||| ||| | || || || || ||||
Sbjct 63259 TGTAACTTCTTGGTATACTCATGGTTTAGCTACTTCATATTTAGAAGGCTGTAA--TTTC 63202
Query 165372 TTA-CTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTCTGG 165430
||| |||| || ||||||||||||||| | ||||||||||||| | | |||| |||
Sbjct 63201 TTAACTGCTGCGGTTTCTACTCCAGCAAATAGTATGGGTCATTCTTTATTATTTCTTTGG 63142
Query 165431 GGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTT 165490
|| || || |||||||| ||||| | ||| ||||||||| || || ||| ||||
Sbjct 63141 GGCCCAGAAGCTCAAGGTGATTTTACTCGTTGGTGCCAACTTGGAGGTCTTTGGACTTTC 63082
Query 165491 GTGGCGCTCCACGGGGCTTTCGCTCTAATTGGTTTCATGCTTCGTCAGTTTGAATTAGCA 165550
|| || || ||||| |||| | || |||||||| ||||||||||| |||||| | ||
Sbjct 63081 GTAGCCCTTCACGGTTCTTTTTCACTGATTGGTTTTATGCTTCGTCAATTTGAAATTGCT 63022
Query 165551 CGTCTCA-TCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTT 165609
||| ||| | || ||||| || || || ||||| || |||| ||| || |||||||
Sbjct 63021 CGT-TCAGTAAAAATTCGTCCATATAACGCGATTGCTTTTTCTGCTCCAATTTCTGTTTT 62963
Query 165610 TGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTT 165669
||| || || || || ||||| | |||||||| ||||||| || || ||| |||
Sbjct 62962 CGTTTCTGTGTTCCTAATTTACCCATTAGGTCAATCAGGTTGGTTCTTTGCACCAAGTTT 62903
Query 165670 CGGGGTCGCAGCAATCTTCAGGTTCCTTCTCTTCCTACAAGGATTCCATAACTGGACCTT 165729
|| || || ||||| ||| | || | | || | ||||| |||||||||||||| ||
Sbjct 62902 TGGTGTTGCGGCAATTTTCCGTTTTATCTTATTTTTTCAAGGCTTCCATAACTGGACTTT 62843
Query 165730 GAATCCCTTTCATATGATGGGTGTTGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCCAT 165789
|| || || |||||||||||||| || ||| | || || | ||| || |||| |||||
Sbjct 62842 AAACCCTTTCCATATGATGGGTGTAGCTGGTGTACTAGGAGCTGCGTTACTTTGCGCCAT 62783
Query 165790 CCATGGTGTTACAGTAGAGAATACTCTGTATCAAGATGGTGACGATGCAAATACTTTCAA 165849
||||||| ||| ||||| || || || | | |||||||||| | |||||| || |||
Sbjct 62782 TCATGGTGCTACTGTAGAAAACACACTTTTTGAAGATGGTGATGGTGCAAACACATTCCG 62723
Query 165850 GGCATTTGACTCTACTCAAGAGGAAGAAACCTACTCAATGGTTACTGCAAACCGTTTCTG 165909
|| ||| || | ||||||| |||||||| ||||| ||||| ||||| ||| | || ||
Sbjct 62722 TGCGTTTAACCCAACTCAAGCAGAAGAAACATACTCTATGGTAACTGCTAACAGATTTTG 62663
Query 165910 GTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTT 165969
|||||| ||||| ||| | || ||| |||||| | ||||| || ||||||||||| ||
Sbjct 62662 GTCTCAAATCTTTGGTGTAGCTTTTTCTAATAAACGTTGGTTACACTTCTTTATGCTTTT 62603
Query 165970 TGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCT 166029
||||||||| | || ||||||| ||| | || ||| | | ||||| ||| | ||| |
Sbjct 62602 TGTTCCTGTAACAGGGCTTTGGATGAGTGCTATTGGTGTAGTAGGTCTAGCTTTAAACTT 62543
Query 166030 TCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGACCCAGAGTTTGAAAC 166089
|||||||| || || || || ||||| || | || |||||||| ||||| ||||||||
Sbjct 62542 ACGTGCTTACGATTTCGTTTCACAAGAAATTCGCGCTGCAGAAGATCCAGAATTTGAAAC 62483
Query 166090 CTTCTACACGAAAAACATTCTCTTGAATGAAGGTCTTCGTGCTTGGTTGGCACCAGTCGA 166149
||||| || ||||| || || || || |||||| ||||||||||| |||| | ||
Sbjct 62482 TTTCTATACCAAAAATATCCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGA 62423
Query 166150 TCAACCGCATGAGAACTTTGTCTTCCCTGAAGAAGTTCTGCCTAGGGGTAACGCGCTGTG 166209
||| || ||||| || |||| |||||||| || ||| | || | || ||||| || |
Sbjct 62422 TCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGCTCT-TT 62364
Query 166210 AATCCTTGGTTTGTTTTC 166227
||| || ||| ||| ||
Sbjct 62363 AATGGTTCGTTAGTTGTC 62346
Score = 401 bits (444), Expect = 7e-107
Identities = 371/470 (79%), Gaps = 0/470 (0%)
Strand=Plus/Minus
Query 164307 AACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTATTTGGCGGTTCTCTG 164366
||||| || |||||||| ||||||||||| |||||||| || |||||||| ||||| |
Sbjct 31300 AACATTCTAATGCACCCATTCCATATGCTAGGCGTTGCCGGTGTATTTGGTGGTTCATTA 31241
Query 164367 TTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCGTGAAACCACCGAAACT 164426
||| ||| ||||||||||| || || |||||||| || |||||||||| || || |
Sbjct 31240 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTCTAATTCGTGAAACAACTGAGAAC 31181
Query 164427 GAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCC 164486
|| || ||| | |||||||| || ||||||||||||||||| |||||||| |||||
Sbjct 31180 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 31121
Query 164487 GCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCC 164546
||||| || ||||| |||||| | || |||||||||||||| || |||||||| |||||
Sbjct 31120 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATACGCTTCTTTTAACAACTCTCGTTCA 31061
Query 164547 TTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGGTTCACCGCACTTGGTGTT 164606
|| || |||||| | ||||| ||||| |||||||| || ||||| || || | ||| ||
Sbjct 31060 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTTACTGCTTTAGGTATT 31001
Query 164607 TCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAG 164666
|| || ||||| |||||| | || ||||||||||||||||| || | | ||| ||
Sbjct 31000 TCAACTATGGCTTTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 30941
Query 164667 GGTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCTGGTCTGGGTATGGAAGTT 164726
|| ||||| | ||||||||||| ||| || ||||||| || || |||||||||||
Sbjct 30940 GGCCGTGTTATTAACACTTGGGCTGACATTATCAACCGTGCCAACCTTGGTATGGAAGTA 30881
Query 164727 ATGCACGAGCGTAACGCTCACAACTTCCCTCTGGATCTCGCTGCTGCTGA 164776
||||| ||||||||||||||||||||||| | ||| | || | || |||
Sbjct 30880 ATGCATGAGCGTAACGCTCACAACTTCCCGTTAGATTTAGCGGTTGTTGA 30831
Score = 367 bits (406), Expect = 1e-96
Identities = 398/525 (76%), Gaps = 2/525 (0%)
Strand=Plus/Minus
Query 163785 TTCTGCGAATGGGTGACTTCCACAAACAACCGCCTCTATGTTGGTTGGTTCGGCGTTCTG 163844
|| || || ||||| ||| ||| | ||||| | || | |||||||| || || |
Sbjct 32746 TTTTGTGAGTGGGTTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATTA 32687
Query 163845 ATGATCCCTACGCTGCTTGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 163903
||||| ||||| | | | ||||| || || || ||| |||| || |||| || ||
Sbjct 32686 ATGATTCCTACTTTATTAACTGCAACT-TCAGTGTTTATCATCGCTTTTATCGCAGCACC 32628
Query 163904 CCCTGTGGACATCGATGGTATTCGTGAACCTGTTGCAGGTTCGCTCATGTATGGTAACAA 163963
||||| || ||||||||||| ||||| || ||| | ||||| || | || || |||||
Sbjct 32627 TCCTGTTGATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCACTTTTATACGGAAACAA 32568
Query 163964 CATCATCTCTGGTGCAGTTGTTCCCTCGTCCAATGCAATTGGTCTTCACTTCTACCCCAT 164023
|||||| |||||||| || |||| | || || ||||| ||| | || |||||||| ||
Sbjct 32567 CATCATTTCTGGTGCTATTATTCCTACTTCTAACGCAATCGGTTTACATTTCTACCCTAT 32508
Query 164024 TTGGGAAGCCGCATCCCTTGATGAATGGCTTTACAACGGTGGTCCTTTCCAACTTGTCGT 164083
||||||||| || || ||||| |||||| | |||||||||||||||| ||||||| ||||
Sbjct 32507 TTGGGAAGCAGCTTCTCTTGACGAATGGTTATACAACGGTGGTCCTTACCAACTTATCGT 32448
Query 164084 CTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTGTCTTACCG 164143
| || ||| | | || |||| | | ||||||||||||||||||||| | |||| |||
Sbjct 32447 TTGTCATTTCTTCTTAGGAATCTGTTCTTACATGGGTCGTGAGTGGGAATTATCTTTCCG 32388
Query 164144 TCTTGGTATGCGTCCTTGGATTTGTGTTGCTTACTCTGCACCCGTTGCAGCAGCATCCGC 164203
| | ||||||||||| |||||| ||||||||||| ||||| ||||| |||||| | ||
Sbjct 32387 TTTAGGTATGCGTCCATGGATTGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCAACAGC 32328
Query 164204 AGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCGTTCTCTGACGCAATGCCCCTGGGCAT 164263
|| ||| | |||| || ||||||||||||| |||||||| | ||||| | || ||
Sbjct 32327 TGTATTCATCATCTACCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTAT 32268
Query 164264 CTCTGGCACCTTCAACTACATGTTGGTGTTCCAAGCAGAGCACAA 164308
||||| || || |||| |||| | || |||||||| ||||| ||
Sbjct 32267 TTCTGGTACATTTAACTTCATGATCGTATTCCAAGCTGAGCATAA 32223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556899738384000
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