Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_015290.1
Length=182180
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 376 3e-99
>seq2029
Length=64692
Score = 376 bits (416), Expect = 3e-99
Identities = 403/533 (76%), Gaps = 0/533 (0%)
Strand=Plus/Minus
Query 169681 TGGCCTCAGTTTACTGATTGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTC 169740
||| ||| ||| ||| ||||| || ||||| | ||||| | || | ||||||||
Sbjct 32755 TGGGCTCGTTTTTGTGAGTGGGTTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTT 32696
Query 169741 GGTGTCTTGATGATCCCATGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATC 169800
||||| || ||||| || | ||||| | ||| | | |||||| | ||||| |||
Sbjct 32695 GGTGTATTAATGATTCCTACTTTATTAACTGCAACTTCAGTGTTTATCATCGCTTTTATC 32636
Query 169801 GCAGCTCCACCTGTGGACATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTAT 169860
||||| || ||||| || |||||||| ||| | || || || | |||||| | | ||
Sbjct 32635 GCAGCACCTCCTGTTGATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCACTTTTATAC 32576
Query 169861 GGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTC 169920
|| ||||||||||| |||||||| || |||| |||| |||||||||||| | || |||
Sbjct 32575 GGAAACAACATCATTTCTGGTGCTATTATTCCTACTTCTAACGCAATCGGTTTACATTTC 32516
Query 169921 TATCCTATTTGGGAAGCAGCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAA 169980
|| ||||||||||||||||| |||| || || ||||| || |||||||||||||| |||
Sbjct 32515 TACCCTATTTGGGAAGCAGCTTCTCTTGACGAATGGTTATACAACGGTGGTCCTTACCAA 32456
Query 169981 TTAGTTATCTTCCACTTCCTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTA 170040
| | | | || ||| | | ||||||| | | ||||||||| | |||||||| ||
Sbjct 32455 CTTATCGTTTGTCATTTCTTCTTAGGAATCTGTTCTTACATGGGTCGTGAGTGGGAATTA 32396
Query 170041 TCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCA 170100
|| | |||||||||||||||||| ||||| || || || || || ||||| | |||
Sbjct 32395 TCTTTCCGTTTAGGTATGCGTCCATGGATTGCAGTTGCTTACTCAGCACCAGTTGCTGCA 32336
Query 170101 GCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCT 170160
||| ||||||||| | | || || ||||||| || |||||||| || || ||||||
Sbjct 32335 GCAACAGCTGTATTCATCATCTACCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCT 32276
Query 170161 CTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCACAA 170213
||||||| || |||||||||||||||||| ||||||||||||| ||||| ||
Sbjct 32275 TTAGGTATTTCTGGTACATTTAACTTCATGATCGTATTCCAAGCTGAGCATAA 32223
Score = 327 bits (362), Expect = 1e-84
Identities = 342/449 (76%), Gaps = 0/449 (0%)
Strand=Plus/Minus
Query 170212 AACATTCTTATGCACCCATTCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTC 170271
|||||||| |||||||||||||||||| ||| ||||| ||| | || || || || |
Sbjct 31300 AACATTCTAATGCACCCATTCCATATGCTAGGCGTTGCCGGTGTATTTGGTGGTTCATTA 31241
Query 170272 TTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAAC 170331
||||| || |||||||||||||||||||| ||||||||||| | || ||||| || |||
Sbjct 31240 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTCTAATTCGTGAAACAACTGAGAAC 31181
Query 170332 GAGTCACAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCA 170391
|| ||| ||| | || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct 31180 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 31121
Query 170392 GCACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGT 170451
|| ||||| ||||| ||| | | || |||||||| ||| |||||||| ||||
Sbjct 31120 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATACGCTTCTTTTAACAACTCTCGTTCA 31061
Query 170452 CTTCACTTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATT 170511
| || |||||| | ||| | | || || || | || ||||| ||| | | ||||||
Sbjct 31060 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTTACTGCTTTAGGTATT 31001
Query 170512 TGCACAATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGATCT 170571
| || ||||| || ||| | ||||| || ||||||||||| ||| | |||||| |
Sbjct 31000 TCAACTATGGCTTTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 30941
Query 170572 GGTAAAGTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTA 170631
|| || || || ||||| ||| || | ||| | || ||||| ||||||||||||
Sbjct 30940 GGCCGTGTTATTAACACTTGGGCTGACATTATCAACCGTGCCAACCTTGGTATGGAAGTA 30881
Query 170632 ATGCATGAGCGTAATGCACACAACTTCCC 170660
|||||||||||||| || |||||||||||
Sbjct 30880 ATGCATGAGCGTAACGCTCACAACTTCCC 30852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582821771840000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |