Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_015569.1
Length=178563
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 376 3e-99
>seq2029
Length=64692
Score = 376 bits (416), Expect = 3e-99
Identities = 400/525 (76%), Gaps = 2/525 (0%)
Strand=Plus/Plus
Query 84432 TTATGTTCCGCCTGGAAGACAAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATG 84491
||||| || || ||||| || | |||| |||| || || || || ||||| | |||||
Sbjct 32223 TTATGCTCAGCTTGGAATACGATCATGAAGTTAAATGTACCAGAAATACCTAAAGGCATA 32282
Query 84492 CCATCAGAGAAAGAACCTTGCCCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCA 84551
|||||||||||||||||||| |||| || || | | ||||||||| | ||| || |||
Sbjct 32283 CCATCAGAGAAAGAACCTTGACCGATTGGGTAGATGATGAATACAGCTGTTGCTGCAGCA 32342
Query 84552 ACTGGAGCAGAGTAAGCAACACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCC 84611
||||| || ||||||||||| ||||||||||||||||| | ||| | || | ||||
Sbjct 32343 ACTGGTGCTGAGTAAGCAACTGCAATCCATGGACGCATACCTAAACGGAAAGATAATTCC 32402
Query 84612 CATTCACGACCCATGTAAGCAAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAA 84671
|| |||||||||||||||| | | || | | ||| ||| | || | |||||| |||
Sbjct 32403 CACTCACGACCCATGTAAGAACAGATTCCTAAGAAGAAATGACAAACGATAAGTTGGTAA 32462
Query 84672 GGTCCACCATTATATAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGT 84731
|| ||||| || |||| ||||||||| | | ||||||||||||||||| |||||||||
Sbjct 32463 GGACCACCGTTGTATAACCATTCGTCAAGAGAAGCTGCTTCCCAAATAGGGTAGAAATGT 32522
Query 84732 AGACCAATAGCATTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATG 84791
| ||| || || ||||| | |||| | |||||||||||||||||||||||||| |
Sbjct 32523 AAACCGATTGCGTTAGAAGTAGGAATAATAGCACCAGAAATGATGTTGTTTCCGTATAAA 32582
Query 84792 AGAGAACCAGCGACTGGCTCACGGATACCGTCAATATCAACTGGGGGTGCACCAACGAAT 84851
|| ||||||| ||||||||||||||||| || |||||||| || ||||| | | ||
Sbjct 32583 AGTGAACCAGAAACTGGCTCACGGATACCATCGATATCAACAGGAGGTGCTGCGATAAAA 32642
Query 84852 GCAATGATGAA-ACAGACAGTGGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCA 84910
|| ||||| || || || ||| |||| | || ||| |||||||| | ||||||||
Sbjct 32643 GCGATGATAAACACTGA-AGTTGCAGTTAATAAAGTAGGAATCATTAATACACCAAACCA 32701
Query 84911 ACCAACATAGATACGGTTGTTAGTGGAGGTGACCCAATCACAGAA 84955
||| | || | |||||| | |||| || ||||| ||||| ||
Sbjct 32702 ACCGATGTATAAACGGTTTTCAGTGCTAGTAACCCACTCACAAAA 32746
Score = 360 bits (398), Expect = 2e-94
Identities = 357/462 (77%), Gaps = 0/462 (0%)
Strand=Plus/Plus
Query 83972 CGCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCC 84031
||| | ||| ||||||||||| || |||||||| || ||||| ||||||||||||||
Sbjct 30839 CGCTAAATCTAACGGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATACCAAGGTT 30898
Query 84032 GGCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACT 84091
|||||| || | | || ||||| || || | ||||||| ||| ||| ||||
Sbjct 30899 GGCACGGTTGATAATGTCAGCCCAAGTGTTAATAACACGGCCTTGTGAATCTACAACTGA 30958
Query 84092 CTGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAA 84151
|| |||||||| || ||||| | || || ||||| || || ||| | ||||| |||
Sbjct 30959 TTGGTTGAAGTTGAAACCATTTAAGTTGAAAGCCATAGTTGAAATACCTAAAGCAGTAAA 31018
Query 84152 CCAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAA 84211
|||||| ||||| |||||||||||||| ||||| || || | |||||| ||||| ||
Sbjct 31019 CCAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAATGTAATGAACGAGAGTTGTTAAA 31078
Query 84212 GGAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGT 84271
||||| || ||||| || | ||||||||||||||| ||||| ||||| || || |||||
Sbjct 31079 AGAAGCGTATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATGTTGTAAGT 31138
Query 84272 TTCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCG 84331
||| |||||||||||||| |||||||| | ||| ||| | || || || ||||| ||
Sbjct 31139 TTCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTCTCAGTTGTTTCACG 31198
Query 84332 GATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATAC 84391
|||||||||||||| ||||||||||| ||||| |||||||||| | ||||| |||||
Sbjct 31199 AATTAGAGAAGAAGTTACAAGTGAACCGTGCATAGCAGAGAATAATGAACCACCAAATAC 31258
Query 84392 ACCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTT 84433
||| ||||| || | ||| || || || ||||| || |||||
Sbjct 31259 ACCGGCAACGCCTAGCATATGGAATGGGTGCATTAGAATGTT 31300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571247892688000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |