Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq2029 320 5e-83 >seq2029 Length=64692 Score = 320 bits (354), Expect = 5e-83 Identities = 353/470 (75%), Gaps = 0/470 (0%) Strand=Plus/Plus Query 35964 TCAGCAGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATG 36023 ||| || | |||| || | ||||||||||| ||||||||||||||||| |||||||| Sbjct 30831 TCAACAACCGCTAAATCTAACGGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATA 30890 Query 36024 CCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCA 36083 || | || ||||||||| | ||||||||||||||| | || | || | ||||| Sbjct 30891 CCAAGGTTGGCACGGTTGATAATGTCAGCCCAAGTGTTAATAACACGGCCTTGTGAATCT 30950 Query 36084 ACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATA 36143 || ||||| || |||||||| || || || | || ||||||||||| || | || | | Sbjct 30951 ACAACTGATTGGTTGAAGTTGAAACCATTTAAGTTGAAAGCCATAGTTGAAATACCTAAA 31010 Query 36144 GCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTA 36203 || |||| ||| || | | || ||||||||||| | |||||||||||| || Sbjct 31011 GCAGTAAACCAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAATGTAATGAACGAGAG 31070 Query 36204 TTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 36263 || ||||| ||| || ||||| || | | || |||||||||||||| ||||| ||| Sbjct 31071 TTGTTAAAAGAAGCGTATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATG 31130 Query 36264 TTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTT 36323 || || || ||||||||||| |||||||| || || | ||| ||||| | ||||| Sbjct 31131 TTGTAAGTTTCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTCTCAGTT 31190 Query 36324 GTTTCACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCA 36383 ||||||||||| || || ||||| ||||| ||||||||||||| |||||| | ||| Sbjct 31191 GTTTCACGAATTAGAGAAGAAGTTACAAGTGAACCGTGCATAGCAGAGAATAATGAACCA 31250 Query 36384 CCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATT 36433 || ||||| || ||||| || ||||||||||| || ||||| || || || Sbjct 31251 CCAAATACACCGGCAACGCCTAGCATATGGAATGGGTGCATTAGAATGTT 31300 Score = 295 bits (326), Expect = 2e-75 Identities = 381/526 (72%), Gaps = 0/526 (0%) Strand=Plus/Plus Query 36432 TTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATA 36491 || || || || || || || | ||| || || || || || |||||||| | ||||||| Sbjct 32223 TTATGCTCAGCTTGGAATACGATCATGAAGTTAAATGTACCAGAAATACCTAAAGGCATA 32282 Query 36492 CCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCA 36551 |||||||||||| ||||| || | ||||||| | ||||||||| |||||| ||| Sbjct 32283 CCATCAGAGAAAGAACCTTGACCGATTGGGTAGATGATGAATACAGCTGTTGCTGCAGCA 32342 Query 36552 ACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCC 36611 || || ||||| ||||| || ||||| || | |||||||| | || | |||| Sbjct 32343 ACTGGTGCTGAGTAAGCAACTGCAATCCATGGACGCATACCTAAACGGAAAGATAATTCC 32402 Query 36612 CATTGTCGTCCCAAGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATAT 36671 || | || |||| ||||| |||| || | || || || | || || ||||| || Sbjct 32403 CACTCACGACCCATGTAAGAACAGATTCCTAAGAAGAAATGACAAACGATAAGTTGGTAA 32462 Query 36672 GGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGA 36731 || || ||||| |||||||| ||||| || | || |||||||| || |||||||| || Sbjct 32463 GGACCACCGTTGTATAACCATTCGTCAAGAGAAGCTGCTTCCCAAATAGGGTAGAAATGT 32522 Query 36732 AGACCGATTGCGTTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGT 36791 | |||||||||||| || | || | || || ||||| |||||||||||||| || | Sbjct 32523 AAACCGATTGCGTTAGAAGTAGGAATAATAGCACCAGAAATGATGTTGTTTCCGTATAAA 32582 Query 36792 AATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAAT 36851 | || || || || |||||||| |||||||| ||||| || ||||| || || | ||| Sbjct 32583 AGTGAACCAGAAACTGGCTCACGGATACCATCGATATCAACAGGAGGTGCTGCGATAAAA 32642 Query 36852 GCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCAC 36911 || || | ||| ||| ||| ||||| | | ||| ||||||| ||| |||||||| Sbjct 32643 GCGATGATAAACACTGAAGTTGCAGTTAATAAAGTAGGAATCATTAATACACCAAACCAA 32702 Query 36912 CCCACATAGAGGCGGTTGTTTGTACTTGTAACCCAGTCACATAAAC 36957 || | || | ||||| | || || |||||||| ||||| |||| Sbjct 32703 CCGATGTATAAACGGTTTTCAGTGCTAGTAACCCACTCACAAAAAC 32748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150447968074400