Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq2029 327 3e-85 >seq2029 Length=64692 Score = 327 bits (362), Expect = 3e-85 Identities = 349/461 (76%), Gaps = 0/461 (0%) Strand=Plus/Plus Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 25512 ||||| || | ||||||||||| ||||||||||||||||| |||||||| || | || | Sbjct 30840 GCTAAATCTAACGGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATACCAAGGTTG 30899 Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572 |||||||| | ||||||||||||||| | || | || | ||||| || ||||| Sbjct 30900 GCACGGTTGATAATGTCAGCCCAAGTGTTAATAACACGGCCTTGTGAATCTACAACTGAT 30959 Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632 || |||||||| || || || | || ||||||||||| || | || | ||| |||| | Sbjct 30960 TGGTTGAAGTTGAAACCATTTAAGTTGAAAGCCATAGTTGAAATACCTAAAGCAGTAAAC 31019 Query 25633 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAG 25692 || || | | || ||||||||||| | |||||||||||| ||| || ||||| Sbjct 31020 CAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAATGTAATGAACGAGAGTTGTTAAAA 31079 Query 25693 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 25752 ||| || ||||| || | | || |||||||||||||| ||||| ||||| || || Sbjct 31080 GAAGCGTATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATGTTGTAAGTT 31139 Query 25753 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 25812 ||||||||||| |||||||| || || | ||| ||||| | |||||||||||||| Sbjct 31140 TCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTCTCAGTTGTTTCACGA 31199 Query 25813 ATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACC 25872 || || || ||||| ||||| ||||||||||||| |||||| | ||||| ||||| Sbjct 31200 ATTAGAGAAGAAGTTACAAGTGAACCGTGCATAGCAGAGAATAATGAACCACCAAATACA 31259 Query 25873 CCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATT 25913 || ||||| || ||||||||||| || ||||| || || || Sbjct 31260 CCGGCAACGCCTAGCATATGGAATGGGTGCATTAGAATGTT 31300 Score = 295 bits (326), Expect = 2e-75 Identities = 381/526 (72%), Gaps = 0/526 (0%) Strand=Plus/Plus Query 25912 TTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATA 25971 || || || || || || || | ||| || || || || || |||||||| | ||||||| Sbjct 32223 TTATGCTCAGCTTGGAATACGATCATGAAGTTAAATGTACCAGAAATACCTAAAGGCATA 32282 Query 25972 CCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCA 26031 |||||||||||| ||||| || | ||||||| | ||||||||| |||||| ||| Sbjct 32283 CCATCAGAGAAAGAACCTTGACCGATTGGGTAGATGATGAATACAGCTGTTGCTGCAGCA 32342 Query 26032 ACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCC 26091 || || ||||| ||||| || ||||| || | ||| |||| | || | |||| Sbjct 32343 ACTGGTGCTGAGTAAGCAACTGCAATCCATGGACGCATACCTAAACGGAAAGATAATTCC 32402 Query 26092 CATTGTCGTCCCAAGTAAGCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATAT 26151 || | || |||| ||||| |||| || | || || || | || |||||||| || Sbjct 32403 CACTCACGACCCATGTAAGAACAGATTCCTAAGAAGAAATGACAAACGATAAGTTGGTAA 32462 Query 26152 GGTCCACCGTTATACAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGA 26211 || |||||||| || ||||| ||||| || | || |||||||| || |||||||| || Sbjct 32463 GGACCACCGTTGTATAACCATTCGTCAAGAGAAGCTGCTTCCCAAATAGGGTAGAAATGT 32522 Query 26212 AGACCGATTGCGTTAGATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGT 26271 | ||||||||||||||| | || | || || || || |||||||||||||| || | Sbjct 32523 AAACCGATTGCGTTAGAAGTAGGAATAATAGCACCAGAAATGATGTTGTTTCCGTATAAA 32582 Query 26272 AATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAAT 26331 | || || || || |||||||| |||||||| ||||| || ||||| || || | ||| Sbjct 32583 AGTGAACCAGAAACTGGCTCACGGATACCATCGATATCAACAGGAGGTGCTGCGATAAAA 32642 Query 26332 GCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCAC 26391 || || | ||| ||| ||| ||||| | | ||| ||||||| ||| |||||||| Sbjct 32643 GCGATGATAAACACTGAAGTTGCAGTTAATAAAGTAGGAATCATTAATACACCAAACCAA 32702 Query 26392 CCCACATAGAGGCGGTTGTTTGTACTTGTAACCCAGTCACATAAAC 26437 || | || | ||||| | || || |||||||| ||||| |||| Sbjct 32703 CCGATGTATAAACGGTTTTCAGTGCTAGTAACCCACTCACAAAAAC 32748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151987102273600