Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq538 118 2e-21 seq326 91.5 3e-13 >seq538 Length=19016 Score = 118 bits (130), Expect = 2e-21 Identities = 128/167 (77%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 25876 GAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGC 25934 ||||| ||| | || |||||| |||||||||||||| ||| ||| || || ||| | Sbjct 16718 GAGCGCCTGATTGCGTTTGCTTGCGTGGAGGGCATCTTCTTCTCCGGCTCCTTCTGC-TC 16776 Query 25935 CATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCAT 25994 |||||||||||||||| || ||| ||||||||| || |||||| ||||||||||| Sbjct 16777 CATCTTCTGGCTCAAGAAGCGAGGGCTCATGCCCGGCCTCACCTTTTCAAACGAGCTCAT 16836 Query 25995 CAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 | ||||| || || |||| ||| ||||| |||||||| |||| Sbjct 16837 TTCTCGTGACGAAGGCCTGCACACAGACTTTGCATGCCTGCTGTACA 16883 >seq326 Length=80286 Score = 91.5 bits (100), Expect = 3e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 221161 GTTAGAAGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGT 221220 ||| || ||| | || || | || ||||||||||||||||||||| ||||||||||| Sbjct 57213 GTTTGATGTGTAAGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGGCTGGTGCTGGCGGT 57272 Query 221221 GGGCATGGGTGCCACCAGCAGACTGTTGCG 221250 ||||||||||||||| ||||| |||||| Sbjct 57273 GGGCATGGGTGCCACGAGCAGCGAGTTGCG 57302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928803001984000