Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_019516.1
Length=161440
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 551 6e-152
seq3507 86.0 6e-12
>seq2029
Length=64692
Score = 551 bits (610), Expect = 6e-152
Identities = 741/1030 (72%), Gaps = 1/1030 (0%)
Strand=Plus/Minus
Query 9814 GTTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGG 9873
|||||| | |||||||||||||| || || || || |||||||| || ||||| ||
Sbjct 63379 GTTTGATGTTGTTGATGACTGGCTTCGTCGCGACCGTTTCGTTTTTGTAGGATGGTCAGG 63320
Query 9874 ACTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTT 9933
||||| | || || ||||| ||||||||| ||||||| ||| |||| || ||||| ||
Sbjct 63319 GTTACTTTTATTCCCGACTGCATATCTTGCACTTGGTGGTTGGTTTACAGGAACTACATT 63260
Query 9934 TGTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCT 9993
||| || |||||| ||||| || | || | | || | || || ||||||| |
Sbjct 63259 TGTAACTTCTTGGTATACTCATGGTTTAGCTACTTCATATTTAGAAGGCTGTAATTTCTT 63200
Query 9994 TACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 10053
|| || || || || || || || || ||||||||||||| | | | ||||||||
Sbjct 63199 AACTGCTGCGGTTTCTACTCCAGCAAATAGTATGGGTCATTCTTTATTATTTCTTTGGGG 63140
Query 10054 TCCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGT 10113
|| || |||| || ||||| || ||| ||| ||||| || || ||| |||| ||
Sbjct 63139 CCCAGAAGCTCAAGGTGATTTTACTCGTTGGTGCCAACTTGGAGGTCTTTGGACTTTCGT 63080
Query 10114 GGCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAG 10173
|| || ||||| | || | | || || |||||| | || || ||||| | || |
Sbjct 63079 AGCCCTTCACGGTTCTTTTTCACTGATTGGTTTTATGCTTCGTCAATTTGAAATTGCTCG 63020
Query 10174 ATTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGT 10233
| | | ||| || || || || || || || ||||||| || ||| ||||||| ||
Sbjct 63019 TTCAGTAAAAATTCGTCCATATAACGCGATTGCTTTTTCTGCTCCAATTTCTGTTTTCGT 62960
Query 10234 CAGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGG 10293
||| ||||| || || ||| | || || || ||||||||||||| || ||||| ||
Sbjct 62959 TTCTGTGTTCCTAATTTACCCATTAGGTCAATCAGGTTGGTTCTTTGCACCAAGTTTTGG 62900
Query 10294 CGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAA 10353
|| ||||| |||||||| || | | || | || ||||| ||||| ||||| | ||
Sbjct 62899 TGTTGCGGCAATTTTCCGTTTTATCTTATTTTTTCAAGGCTTCCATAACTGGACTTTAAA 62840
Query 10354 TCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCA 10413
|| |||||||||||||| || |||||| |||| |||| ||| | || | || || ||
Sbjct 62839 CCCTTTCCATATGATGGGTGTAGCTGGTGTACTAGGAGCTGCGTTACTTTGCGCCATTCA 62780
Query 10414 CGGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGC 10473
|| | ||||||||||||||||||| | ||||||| || |||||||| ||| ||
Sbjct 62779 TGGTGCTACTGTAGAAAACACACTTTTTGAAGATGGTGATGGTGCAAACACATTCCGTGC 62720
Query 10474 TTTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTC 10533
||| | ||||||| |||||| || || || ||||| ||||||||| | || |||||
Sbjct 62719 GTTTAACCCAACTCAAGCAGAAGAAACATACTCTATGGTAACTGCTAACAGATTTTGGTC 62660
Query 10534 CCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGT 10593
|| || ||||| | |||||| |||||||| ||| | || ||||||||||| |||||
Sbjct 62659 TCAAATCTTTGGTGTAGCTTTTTCTAATAAACGTTGGTTACACTTCTTTATGCTTTTTGT 62600
Query 10594 ACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCG 10653
||||| | || ||||||| | ||||||| | | ||||| ||| | || | ||
Sbjct 62599 TCCTGTAACAGGGCTTTGGATGAGTGCTATTGGTGTAGTAGGTCTAGCTTTAAACTTACG 62540
Query 10654 TGCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTT 10713
|||||||||||| || || ||||| || | || |||||||||| |||||||| || ||
Sbjct 62539 TGCTTACGATTTCGTTTCACAAGAAATTCGCGCTGCAGAAGATCCAGAATTTGAAACTTT 62480
Query 10714 CTATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCA 10773
|||||| || ||||||||| | ||||||||| ||||||| |||||||| | || ||
Sbjct 62479 CTATACCAAAAATATCCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCA 62420
Query 10774 ACCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCCTAGAGGTAATGCACTGTGAT- 10832
|| || |||| |||| ||||| || || ||| | || | || || || || | ||
Sbjct 62419 GCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGCTCTTTAATG 62360
Query 10833 ATTCCTTAGT 10842
||| |||||
Sbjct 62359 GTTCGTTAGT 62350
Score = 347 bits (384), Expect = 1e-90
Identities = 359/470 (76%), Gaps = 0/470 (0%)
Strand=Plus/Minus
Query 8770 AACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCTC 8829
||||| || |||||||| ||||| ||||| || ||||| ||||| || || || || |
Sbjct 31300 AACATTCTAATGCACCCATTCCATATGCTAGGCGTTGCCGGTGTATTTGGTGGTTCATTA 31241
Query 8830 TTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAACC 8889
|| || || ||||| |||||||| || |||||||| || ||||||| || || || | |
Sbjct 31240 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTCTAATTCGTGAAACAACTGAGAAC 31181
Query 8890 GAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCC 8949
|| || ||| | || ||||| |||||||||||||| |||||||||||||| |||||
Sbjct 31180 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 31121
Query 8950 GCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAGC 9009
|||||||||||||| ||||| || || |||||||| || ||||||||||| ||| |
Sbjct 31120 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATACGCTTCTTTTAACAACTCTCGTTCA 31061
Query 9010 TTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGTC 9069
|| ||||||||| | ||||| ||||| || || || || |||||||| || | || |
Sbjct 31060 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTTACTGCTTTAGGTATT 31001
Query 9070 TCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACAA 9129
|| || |||||||||||| | ||||| |||||||||||||| || || | || ||||
Sbjct 31000 TCAACTATGGCTTTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 30941
Query 9130 GGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGTC 9189
|| || || | ||||| ||||| ||| | | ||||| || || |||||||||||
Sbjct 30940 GGCCGTGTTATTAACACTTGGGCTGACATTATCAACCGTGCCAACCTTGGTATGGAAGTA 30881
Query 9190 ATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGCTGCTGA 9239
||||| || | ||||| |||||||||||| | || | |||| || |||
Sbjct 30880 ATGCATGAGCGTAACGCTCACAACTTCCCGTTAGATTTAGCGGTTGTTGA 30831
Score = 345 bits (382), Expect = 4e-90
Identities = 395/528 (75%), Gaps = 6/528 (1%)
Strand=Plus/Minus
Query 8247 TTTTTGCGAATGGGTCACTTCGACCAATAATCGCTTGTATGTCGGCTGGTTTGGCGTTCT 8306
|||||| || ||||| ||| || | || || || || |||| |||||||| || |
Sbjct 32747 TTTTTGTGAGTGGGTTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATT 32688
Query 8307 CATGATCCCAACCCTTCTTGCCGCTACAATT---TGCTTCATTACCGCATTCGTTGCTGC 8363
||||| || || | | | || || || || || || | ||| || | || ||
Sbjct 32687 AATGATTCCTACTTTATTAACTGCAAC--TTCAGTGTTT-ATCATCGCTTTTATCGCAGC 32631
Query 8364 TCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATCTCTCATGTACGGTAA 8423
|||||||| || ||||| || ||||| || |||||| |||| || || | ||||| ||
Sbjct 32630 ACCTCCTGTTGATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCACTTTTATACGGAAA 32571
Query 8424 CAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGGCCTCCACTTCTACCC 8483
||||||||| |||||||| || |||| | ||||||||||| || | || ||||||||
Sbjct 32570 CAACATCATTTCTGGTGCTATTATTCCTACTTCTAACGCAATCGGTTTACATTTCTACCC 32511
Query 8484 CATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGGTCCTTACCAGCTTGT 8543
|| |||||||| ||||||||||| || ||| | |||||||||||||||||||| ||| |
Sbjct 32510 TATTTGGGAAGCAGCTTCTCTTGACGAATGGTTATACAACGGTGGTCCTTACCAACTTAT 32451
Query 8544 AGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGAATGGGAACTTTCTTA 8603
|||| || ||| || | || ||| | |||| ||||||||||| |||||| | ||||
Sbjct 32450 CGTTTGTCATTTCTTCTTAGGAATCTGTTCTTACATGGGTCGTGAGTGGGAATTATCTTT 32391
Query 8604 CCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCCTGTTGCCGCTGCTTC 8663
||| | || |||||||| ||||| ||||| ||||| || || ||||| || || |
Sbjct 32390 CCGTTTAGGTATGCGTCCATGGATTGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCAAC 32331
Query 8664 TGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGATGGTATGCCTCTTGG 8723
||||||||| | |||| || | ||||||||||| |||||||||||||||||| | ||
Sbjct 32330 AGCTGTATTCATCATCTACCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGG 32271
Query 8724 TATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCACAA 8771
||| || ||||| || |||| ||| | || ||||| |||||||| ||
Sbjct 32270 TATTTCTGGTACATTTAACTTCATGATCGTATTCCAAGCTGAGCATAA 32223
>seq3507
Length=10852
Score = 86.0 bits (94), Expect = 6e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 15401 TCGGGAATTAGCGCAGTTTGGTAGCGCGCCTGCTTTGGGAGCAGGATGCCACAGGTTCAA 15460
|||||| ||||||||||||||||||| |||| ||||||| ||||| | | ||||||| |
Sbjct 9031 TCGGGATGTAGCGCAGTTTGGTAGCGCTCCTGTTTTGGGAACAGGAGGTCGCAGGTTCGA 8972
Query 15461 ATCCTGTATTCCCGA 15475
||||||| ||||||
Sbjct 8971 ATCCTGTCATCCCGA 8957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 516456758400000
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