Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_020838.1
Length=45728
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 347 4e-91
>seq2029
Length=64692
Score = 347 bits (384), Expect = 4e-91
Identities = 347/450 (77%), Gaps = 0/450 (0%)
Strand=Plus/Plus
Query 21482 CGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTGGCACGGTTAAG 21541
|||||||||||| ||||| ||||||||||| || || | ||||||||||||||||| |
Sbjct 30851 CGGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATACCAAGGTTGGCACGGTTGAT 30910
Query 21542 AATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGATTGGTTAAAGTT 21601
|||||||||||| ||||| || || | || | | | ||| | |||||||| |||||
Sbjct 30911 AATGTCAGCCCAAGTGTTAATAACACGGCCTTGTGAATCTACAACTGATTGGTTGAAGTT 30970
Query 21602 GAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAACCAAATACCTAC 21661
||||||||| |||||||||||||| || || | || | |||| |||||||||||| ||
Sbjct 30971 GAAACCATTTAAGTTGAAAGCCATAGTTGAAATACCTAAAGCAGTAAACCAAATACCAAC 31030
Query 21662 AACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAGCTAGCATATTG 21721
||| ||||| ||||| | |||||||| | ||| || || ||||| ||| |||||
Sbjct 31031 AACTGGCCAAGCAGCTAAGAAGAAATGTAATGAACGAGAGTTGTTAAAAGAAGCGTATTG 31090
Query 21722 GAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTCTCTTCCTCTTG 21781
||| || | ||||| || ||||| ||||| ||||| || |||||||| ||||| |||||
Sbjct 31091 GAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATGTTGTAAGTTTCTTCTTCTTG 31150
Query 21782 ACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGAATGAGTGACGA 21841
||| || |||||||| | ||| ||| | | ||||| || |||||||| || || ||
Sbjct 31151 ACCGAATTTGTAACCTTCGTTAGCTGATTCGTTCTCAGTTGTTTCACGAATTAGAGAAGA 31210
Query 21842 CGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACGCCGGCCACACC 21901
|| || || |||||||||||||||||| || ||||||||||| ||||| || ||
Sbjct 31211 AGTTACAAGTGAACCGTGCATAGCAGAGAATAATGAACCACCAAATACACCGGCAACGCC 31270
Query 21902 CAGCATGTGAAAAGGATGCATAAGAATATT 21931
||||| || || || ||||| ||||| ||
Sbjct 31271 TAGCATATGGAATGGGTGCATTAGAATGTT 31300
Score = 269 bits (298), Expect = 8e-68
Identities = 381/528 (72%), Gaps = 8/528 (2%)
Strand=Plus/Plus
Query 21930 TTGTGCTCAGCCTGGAACACCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATA 21989
|| |||||||| ||||| || | |||| |||| || || || || || || || ||||||
Sbjct 32223 TTATGCTCAGCTTGGAATACGATCATGAAGTTAAATGTACCAGAAATACCTAAAGGCATA 32282
Query 21990 GCATCAGAAAAAGAGCCCTGTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCG 22049
||||||| ||||| || || || | || || | | ||| ||||| || || || ||
Sbjct 32283 CCATCAGAGAAAGAACCTTGACCGATTGGGTAGATGATGAATACAGCTGTTGCTGCAGCA 32342
Query 22050 ACAGGAGCAGAGTACGCAACAAAGATCCAGGGCCTCATCCCTAGTCG-ATAGCTAAGTTC 22108
|| || || ||||| ||||| ||||| || | ||| |||| || | || ||| |||
Sbjct 32343 ACTGGTGCTGAGTAAGCAACTGCAATCCATGGACGCATACCTAAACGGAAAGATAA-TTC 32401
Query 22109 CCACTCTCGTCCCATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAA 22168
|||||| || |||||||||| | ||| || | || ||| || | ||| | |||||| |
Sbjct 32402 CCACTCACGACCCATGTAAGAACAGATTCCTAAGAAGAAATGACAAACGATAAGTTGGTA 32461
Query 22169 TGGACCGCCGTTGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTG 22228
||||| |||||||| | |||||| ||||| | ||| ||||||||||| |||||||| ||
Sbjct 32462 AGGACCACCGTTGTATAACCATTCGTCAAGAGAAGCTGCTTCCCAAATAGGGTAGAAATG 32521
Query 22229 TAGTCCGATGGCATTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAA 22288
|| ||||| || ||| | |||| | || || || ||||||||||| || || ||
Sbjct 32522 TAAACCGATTGCGTTAGAAGTAGGAATAATAGCACCAGAAATGATGTTGTTTCCGTATAA 32581
Query 22289 CAGGGAGCCAGCGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAA 22348
|| || |||| || || || ||||| |||||||| |||||||| ||||| | | |||
Sbjct 32582 AAGTGAACCAGAAACTGGCTCACGGATACCATCGATATCAACAGGAGGTGCTGCGATAAA 32641
Query 22349 GGCGATAATAAA-AC--AAGTTGTAGCGGCAAGGAGGCACGGAATCATAAGGACTCCGAA 22405
||||| ||||| || |||||| | | || | | | |||||||| | || || ||
Sbjct 32642 AGCGATGATAAACACTGAAGTTGCA--GTTAATAAAGTA-GGAATCATTAATACACCAAA 32698
Query 22406 CCATCCTACATAAAGACGGTTATTAGTAGAGGTGACCCAGGAACAAAA 22453
||| || | || | |||||| | ||| || ||||| ||||||
Sbjct 32699 CCAACCGATGTATAAACGGTTTTCAGTGCTAGTAACCCACTCACAAAA 32746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146201749608000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |