Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq538 123 3e-23
seq3285 91.5 2e-13
>seq538
Length=19016
Score = 123 bits (136), Expect = 3e-23
Identities = 122/158 (77%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130
||| | |||||||| |||||||||| || |||||||| |||||||||||||| || |||
Sbjct 16712 TTCTCAGAGCGCCTGATTGCGTTTGCTTGCGTGGAGGGCATCTTCTTCTCCGGCTCCTTC 16771
Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190
||| | || | ||| | |||||||| || |||||||| ||||| ||| ||||| ||
Sbjct 16772 TGCTCCATCTTCTGGCTCAAGAAGCGAGGGCTCATGCCCGGCCTCACCTTTTCAAACGAG 16831
Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
|| ||||| || || || || || ||| || |||||
Sbjct 16832 CTCATTTCTCGTGACGAAGGCCTGCACACAGACTTTGC 16869
>seq3285
Length=63365
Score = 91.5 bits (100), Expect = 2e-13
Identities = 111/151 (74%), Gaps = 3/151 (2%)
Strand=Plus/Plus
Query 65021 AGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGC 65080
||||||||||| | ||||| ||||| ||| | || | | ||| ||| || ||||
Sbjct 18720 AGAAGAAGGCGCAGTGGGCGATGAAGTGGATAGAGAGCAGCA---GCTGCTTTGCAGAGC 18776
Query 65081 GCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTT 65140
| ||| | || | |||||||||||||| ||| |||||| || || |||||| | || |
Sbjct 18777 GGCTTGTCGCCTACGCGTGTGTGGAGGGCATCCACTTCTCTGGCTCTTTCTGCTCGATCT 18836
Query 65141 ATTGGTTGAAGAAGCGGGGTCTCATGCCAGG 65171
||| ||||||||||| |||||||| ||
Sbjct 18837 TCTGGCTGAAGAAGCGGCAGCTCATGCCTGG 18867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596542754368000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |