Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_020855.1
Length=192497
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 351 1e-91
>seq2029
Length=64692
Score = 351 bits (388), Expect = 1e-91
Identities = 392/524 (75%), Gaps = 0/524 (0%)
Strand=Plus/Plus
Query 8350 TTATGCTCTGCTTGGAATACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATT 8409
|||||||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||
Sbjct 32223 TTATGCTCAGCTTGGAATACGATCATGAAGTTAAATGTACCAGAAATACCTAAAGGCATA 32282
Query 8410 CCATCAGAGAATGAACCCTGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGAT 8469
||||||||||| ||||| ||||| | ||| || | | ||| || || || ||||
Sbjct 32283 CCATCAGAGAAAGAACCTTGACCGATTGGGTAGATGATGAATACAGCTGTTGCTGCAGCA 32342
Query 8470 ACTGGAGCACTATATGCTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCC 8529
||||| || || || || |||||||| | ||||||||| ||| | ||||| |||
Sbjct 32343 ACTGGTGCTGAGTAAGCAACTGCAATCCATGGACGCATACCTAAACGGAAAGATAATTCC 32402
Query 8530 CACTGTCTACCCATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATAT 8589
|||| | ||||||||||| | | ||||| | | ||| || | | | | || ||
Sbjct 32403 CACTCACGACCCATGTAAGAACAGATTCCTAAGAAGAAATGACAAACGATAAGTTGGTAA 32462
Query 8590 GGACCTCCGTTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGT 8649
||||| ||||| || ||||| || || | | || ||||||||||| || ||||| |||
Sbjct 32463 GGACCACCGTTGTATAACCATTCGTCAAGAGAAGCTGCTTCCCAAATAGGGTAGAAATGT 32522
Query 8650 AATCCAATAGCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATG 8709
|| || || ||||| |||| |||| | ||||||||| |||||||||||||| || |
Sbjct 32523 AAACCGATTGCGTTAGAAGTAGGAATAATAGCACCAGAAATGATGTTGTTTCCGTATAAA 32582
Query 8710 AATGAACCTGCAACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAAT 8769
| |||||| | ||| || ||||| ||||| |||||||| ||||| || || || |||||
Sbjct 32583 AGTGAACCAGAAACTGGCTCACGGATACCATCGATATCAACAGGAGGTGCTGCGATAAAA 32642
Query 8770 GCCACGATAAAGCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAA 8829
|| | |||||| | || |||| ||| || ||||||||||| || |||||||||
Sbjct 32643 GCGATGATAAACACTGAAGTTGCAGTTAATAAAGTAGGAATCATTAATACACCAAACCAA 32702
Query 8830 CCGACATAAAGTCTGTTGTTTGTACTTGTAACCCACTCGCAAAA 8873
|||| || | | ||| | || || ||||||||||| |||||
Sbjct 32703 CCGATGTATAAACGGTTTTCAGTGCTAGTAACCCACTCACAAAA 32746
Score = 286 bits (316), Expect = 4e-72
Identities = 340/461 (74%), Gaps = 0/461 (0%)
Strand=Plus/Plus
Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950
||||| ||||| ||||||||||| || || | |||||||| ||||||||||| | |||
Sbjct 30840 GCTAAATCTAACGGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATACCAAGGTTG 30899
Query 7951 GCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGAT 8010
|| | ||| | | |||| |||| || ||| | || | ||| |||||||||
Sbjct 30900 GCACGGTTGATAATGTCAGCCCAAGTGTTAATAACACGGCCTTGTGAATCTACAACTGAT 30959
Query 8011 TGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAAC 8070
||||| ||||| || || || | ||| || ||||| || ||||||| | || ||| |||
Sbjct 30960 TGGTTGAAGTTGAAACCATTTAAGTTGAAAGCCATAGTTGAAATACCTAAAGCAGTAAAC 31019
Query 8071 CAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTTAAAC 8130
|||| || |||||||| | | ||| | |||||| || | | | |||||||||
Sbjct 31020 CAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAATGTAATGAACGAGAGTTGTTAAAA 31079
Query 8131 GATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGTC 8190
|| || || ||||| ||||| | ||| ||||| |||||||| ||||| || || || ||
Sbjct 31080 GAAGCGTATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATGTTGTAAGTT 31139
Query 8191 TCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTG 8250
|||||||||||||| || || ||||| | ||| || || | |||||||| || |
Sbjct 31140 TCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTCTCAGTTGTTTCACGA 31199
Query 8251 ATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATA 8310
||||||||||| || || | ||||||||||||||| ||| | ||| ||||| || | |
Sbjct 31200 ATTAGAGAAGAAGTTACAAGTGAACCGTGCATAGCAGAGAATAATGAACCACCAAATACA 31259
Query 8311 CCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTT 8351
|| || || ||| ||||||||| || ||||| ||||||||
Sbjct 31260 CCGGCAACGCCTAGCATATGGAATGGGTGCATTAGAATGTT 31300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 615834686192000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |