Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq2029 351 1e-91 >seq2029 Length=64692 Score = 351 bits (388), Expect = 1e-91 Identities = 392/524 (75%), Gaps = 0/524 (0%) Strand=Plus/Plus Query 8350 TTATGCTCTGCTTGGAATACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATT 8409 |||||||| ||||||||||||| |||||||||||| |||||||||||||||| |||||| Sbjct 32223 TTATGCTCAGCTTGGAATACGATCATGAAGTTAAATGTACCAGAAATACCTAAAGGCATA 32282 Query 8410 CCATCAGAGAATGAACCCTGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGAT 8469 ||||||||||| ||||| ||||| | ||| || | | ||| || || || |||| Sbjct 32283 CCATCAGAGAAAGAACCTTGACCGATTGGGTAGATGATGAATACAGCTGTTGCTGCAGCA 32342 Query 8470 ACTGGAGCACTATATGCTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCC 8529 ||||| || || || || |||||||| | ||||||||| ||| | ||||| ||| Sbjct 32343 ACTGGTGCTGAGTAAGCAACTGCAATCCATGGACGCATACCTAAACGGAAAGATAATTCC 32402 Query 8530 CACTGTCTACCCATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATAT 8589 |||| | ||||||||||| | | ||||| | | ||| || | | | | || || Sbjct 32403 CACTCACGACCCATGTAAGAACAGATTCCTAAGAAGAAATGACAAACGATAAGTTGGTAA 32462 Query 8590 GGACCTCCGTTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGT 8649 ||||| ||||| || ||||| || || | | || ||||||||||| || ||||| ||| Sbjct 32463 GGACCACCGTTGTATAACCATTCGTCAAGAGAAGCTGCTTCCCAAATAGGGTAGAAATGT 32522 Query 8650 AATCCAATAGCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATG 8709 || || || ||||| |||| |||| | ||||||||| |||||||||||||| || | Sbjct 32523 AAACCGATTGCGTTAGAAGTAGGAATAATAGCACCAGAAATGATGTTGTTTCCGTATAAA 32582 Query 8710 AATGAACCTGCAACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAAT 8769 | |||||| | ||| || ||||| ||||| |||||||| ||||| || || || ||||| Sbjct 32583 AGTGAACCAGAAACTGGCTCACGGATACCATCGATATCAACAGGAGGTGCTGCGATAAAA 32642 Query 8770 GCCACGATAAAGCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAA 8829 || | |||||| | || |||| ||| || ||||||||||| || ||||||||| Sbjct 32643 GCGATGATAAACACTGAAGTTGCAGTTAATAAAGTAGGAATCATTAATACACCAAACCAA 32702 Query 8830 CCGACATAAAGTCTGTTGTTTGTACTTGTAACCCACTCGCAAAA 8873 |||| || | | ||| | || || ||||||||||| ||||| Sbjct 32703 CCGATGTATAAACGGTTTTCAGTGCTAGTAACCCACTCACAAAA 32746 Score = 286 bits (316), Expect = 4e-72 Identities = 340/461 (74%), Gaps = 0/461 (0%) Strand=Plus/Plus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 ||||| ||||| ||||||||||| || || | |||||||| ||||||||||| | ||| Sbjct 30840 GCTAAATCTAACGGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATACCAAGGTTG 30899 Query 7951 GCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGAT 8010 || | ||| | | |||| |||| || ||| | || | ||| ||||||||| Sbjct 30900 GCACGGTTGATAATGTCAGCCCAAGTGTTAATAACACGGCCTTGTGAATCTACAACTGAT 30959 Query 8011 TGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAAC 8070 ||||| ||||| || || || | ||| || ||||| || ||||||| | || ||| ||| Sbjct 30960 TGGTTGAAGTTGAAACCATTTAAGTTGAAAGCCATAGTTGAAATACCTAAAGCAGTAAAC 31019 Query 8071 CAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTTAAAC 8130 |||| || |||||||| | | ||| | |||||| || | | | ||||||||| Sbjct 31020 CAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAATGTAATGAACGAGAGTTGTTAAAA 31079 Query 8131 GATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGTC 8190 || || || ||||| ||||| | ||| ||||| |||||||| ||||| || || || || Sbjct 31080 GAAGCGTATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATGTTGTAAGTT 31139 Query 8191 TCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTG 8250 |||||||||||||| || || ||||| | ||| || || | |||||||| || | Sbjct 31140 TCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTCTCAGTTGTTTCACGA 31199 Query 8251 ATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATA 8310 ||||||||||| || || | ||||||||||||||| ||| | ||| ||||| || | | Sbjct 31200 ATTAGAGAAGAAGTTACAAGTGAACCGTGCATAGCAGAGAATAATGAACCACCAAATACA 31259 Query 8311 CCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTT 8351 || || || ||| ||||||||| || ||||| |||||||| Sbjct 31260 CCGGCAACGCCTAGCATATGGAATGGGTGCATTAGAATGTT 31300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615834686192000