Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_020865.1
Length=45730
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 347 4e-91
>seq2029
Length=64692
Score = 347 bits (384), Expect = 4e-91
Identities = 347/450 (77%), Gaps = 0/450 (0%)
Strand=Plus/Minus
Query 41756 AATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTG 41815
|| ||||| ||||| || || || ||||| || || ||||| ||||||||||| ||
Sbjct 31300 AACATTCTAATGCACCCATTCCATATGCTAGGCGTTGCCGGTGTATTTGGTGGTTCATTA 31241
Query 41816 TTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAG 41875
|||||||||||||||||| || || || || || || |||||||| || ||||| |
Sbjct 31240 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTCTAATTCGTGAAACAACTGAGAAC 31181
Query 41876 GTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCT 41935
| ||| ||| | |||||||| || |||||||| ||||| |||||||| || |||||
Sbjct 31180 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 31121
Query 41936 GCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGT 41995
||||| ||||| || ||||| | || |||||||| ||| ||||| || || |||
Sbjct 31120 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATACGCTTCTTTTAACAACTCTCGTTCA 31061
Query 41996 CTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTG 42055
| |||||||| | ||||| ||||| ||||| |||||||||||| |||| | || |
Sbjct 31060 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTTACTGCTTTAGGTATT 31001
Query 42056 TCTACCATGGCTTTCAACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGAT 42115
|| || |||||||||||||| |||||||||||||| |||||||| | ||| | | |
Sbjct 31000 TCAACTATGGCTTTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 30941
Query 42116 GGACAGGTGATCAACACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTG 42175
|| | || || ||||| |||||||||||| | ||||||||||||||||| | || ||
Sbjct 30940 GGCCGTGTTATTAACACTTGGGCTGACATTATCAACCGTGCCAACCTTGGTATGGAAGTA 30881
Query 42176 ATGCATGAGCGGAACGCACACAACTTCCCG 42205
||||||||||| ||||| ||||||||||||
Sbjct 30880 ATGCATGAGCGTAACGCTCACAACTTCCCG 30851
Score = 269 bits (298), Expect = 8e-68
Identities = 381/528 (72%), Gaps = 8/528 (2%)
Strand=Plus/Minus
Query 41234 TTTTGTTCCTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTT 41293
|||||| ||||| || ||| | |||||| | || | || ||||| || || |
Sbjct 32746 TTTTGTGAGTGGGTTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATTA 32687
Query 41294 ATGATTCCGTGCCTCCTTGCCGCTACAACTT--GT-TTTATTATCGCCTTTGTTGGCGCA 41350
|||||||| | | | || | | |||||| || ||||| ||||| ||| | | |||
Sbjct 32686 ATGATTCC-TACTTTATTAAC--TGCAACTTCAGTGTTTATCATCGCTTTTATCGCAGCA 32630
Query 41351 CCACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAAC 41410
|| |||||||| |||||||| ||||| || || || |||| || || || || || |||
Sbjct 32629 CCTCCTGTTGATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCACTTTTATACGGAAAC 32570
Query 41411 AACATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCA 41470
|||||||| || || || | |||| | ||| || ||||| |||| ||||||||
Sbjct 32569 AACATCATTTCTGGTGCTATTATTCCTACTTCTAACGCAATCGGTTTACATTTCTACCCT 32510
Query 41471 ATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACC 41530
||||||||||| ||| | ||||| |||||| | |||||||| ||||| | |||||| | |
Sbjct 32509 ATTTGGGAAGCAGCTTCTCTTGACGAATGGTTATACAACGGTGGTCCTTACCAACTTATC 32450
Query 41531 GTATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTAT 41590
|| | || ||| || | || ||| | |||||||||| || ||||||||| ||| || |
Sbjct 32449 GTTTGTCATTTCTTCTTAGGAATCTGTTCTTACATGGGTCGTGAGTGGGAA-TTATCTTT 32391
Query 41591 -CGACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGAC 41649
|| |||| ||| | || ||||| ||||| ||||| || || || || || || ||
Sbjct 32390 CCGTTTAGGTATGCGTCCATGGATTGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCAAC 32331
Query 41650 TGCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGG 41709
||||| ||| | | || || | || || || ||||| ||||||| |||||| || ||
Sbjct 32330 AGCTGTATTCATCATCTACCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGG 32271
Query 41710 GATATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAA 41757
|| || || || || |||| |||| | || ||||| |||||||| ||
Sbjct 32270 TATTTCTGGTACATTTAACTTCATGATCGTATTCCAAGCTGAGCATAA 32223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146208149334400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |