Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_020874.1
Length=46198
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 279 2e-70
>seq2029
Length=64692
Score = 279 bits (308), Expect = 2e-70
Identities = 376/524 (72%), Gaps = 0/524 (0%)
Strand=Plus/Plus
Query 26336 TTATGTTCTGCTTGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATT 26395
||||| || ||||||||||||| ||| |||||||| |||||||| ||||| | ||||||
Sbjct 32223 TTATGCTCAGCTTGGAATACGATCATGAAGTTAAATGTACCAGAAATACCTAAAGGCATA 32282
Query 26396 CCATCACTAAAACTCCCTTGTCCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGAT 26455
|||||| ||| ||||| |||| || || | | ||| || || ||||| |
Sbjct 32283 CCATCAGAGAAAGAACCTTGACCGATTGGGTAGATGATGAATACAGCTGTTGCTGCAGCA 32342
Query 26456 AGTGGTGCTGTATATGCAACAAATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCC 26515
| |||||||| || ||||| |||||||| | ||| |||| | | |||||| ||||
Sbjct 32343 ACTGGTGCTGAGTAAGCAACTGCAATCCATGGACGCATACCTAAACGGAAAGATAATTCC 32402
Query 26516 CACTGTCTCCCTGCATATGCTGCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATAT 26575
|||| | || || | | ||||| ||||| || | | || ||||| ||
Sbjct 32403 CACTCACGACCCATGTAAGAACAGATTCCTAAGAAGAAATGACAAACGATAAGTTGGTAA 32462
Query 26576 GGTCCGCCATTGTATAGCCACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGT 26635
|| || || ||||||| ||| ||||| || | | |||||||| || ||||| ||||||
Sbjct 32463 GGACCACCGTTGTATAACCATTCGTCAAGAGAAGCTGCTTCCCAAATAGGGTAGAAATGT 32522
Query 26636 AGTCCGATTGCGTTAGAGGAGGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATT 26695
| |||||||||||||| | || | | || || || || || ||||||||||| |
Sbjct 32523 AAACCGATTGCGTTAGAAGTAGGAATAATAGCACCAGAAATGATGTTGTTTCCGTATAAA 32582
Query 26696 AACGAGCCGGAAACTGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAG 26755
| || || |||||||||||||| || ||||| ||||| ||||| ||||||||||| ||
Sbjct 32583 AGTGAACCAGAAACTGGCTCACGGATACCATCGATATCAACAGGAGGTGCTGCGATAAAA 32642
Query 26756 GCAAGTATAAAACATGTAGTGGCTGCGAGTAAGCAGGGTATCATAAGCACCCCGAACCAT 26815
|| | ||||| || ||| || | | ||| || ||||| | || || |||||
Sbjct 32643 GCGATGATAAACACTGAAGTTGCAGTTAATAAAGTAGGAATCATTAATACACCAAACCAA 32702
Query 26816 CCCACATAGAGACGGTTCTCAGTACTTGTAACCCACTCACAAAA 26859
|| | || | |||||| ||||| || |||||||||||||||||
Sbjct 32703 CCGATGTATAAACGGTTTTCAGTGCTAGTAACCCACTCACAAAA 32746
Score = 226 bits (250), Expect = 8e-55
Identities = 329/462 (71%), Gaps = 2/462 (0%)
Strand=Plus/Plus
Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936
||||| || | || ||||| ||||| |||||||| ||||| ||||| | || |||||
Sbjct 30840 GCTAAATCTAACGGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATACCAAGGTTG 30899
Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACA-TCTACTACTGA 25995
|| ||||| | | |||||||| || | || || | | || | ||||| |||||
Sbjct 30900 GCACGGTTGATAATGTCAGCCCAAGT-GTTAATAACACGGCCTTGTGAATCTACAACTGA 30958
Query 25996 CTGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAG 26055
||||| ||||| |||||||||| ||| || ||||| || | ||||| | || || |
Sbjct 30959 TTGGTTGAAGTTGAAACCATTTAAGTTGAAAGCCATAGTTGAAATACCTAAAGCAGTAAA 31018
Query 26056 CCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAA 26115
||| || |||||||| ||||||| ||| | |||||||| | ||||| ||| |||||
Sbjct 31019 CCAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAATGTAATGAACGAGAGTTGTTAAA 31078
Query 26116 ACTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGT 26175
| || || || |||||||| | || ||||| || || || || || || || || ||
Sbjct 31079 AGAAGCGTATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATGTTGTAAGT 31138
Query 26176 CTCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGC 26235
||||| ||||| || || || || || | || ||| | | ||| || |||||
Sbjct 31139 TTCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTCTCAGTTGTTTCACG 31198
Query 26236 AATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAAC 26295
||| || || ||||| || | ||||||||||||| ||| | | ||||| || ||
Sbjct 31199 AATTAGAGAAGAAGTTACAAGTGAACCGTGCATAGCAGAGAATAATGAACCACCAAATAC 31258
Query 26296 CCCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATT 26337
|| ||||| || |||||||||||||||||| || || ||
Sbjct 31259 ACCGGCAACGCCTAGCATATGGAATGGGTGCATTAGAATGTT 31300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 147705685312000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |