Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_020875.1
Length=182801
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 351 1e-91
>seq2029
Length=64692
Score = 351 bits (388), Expect = 1e-91
Identities = 388/517 (75%), Gaps = 0/517 (0%)
Strand=Plus/Minus
Query 154976 AGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCC 155035
||||||| ||| |||| ||||| | || |||||||||| ||||| | ||||| |
Sbjct 32739 AGTGGGTTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATTAATGATTC 32680
Query 155036 CTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAG 155095
|| | | |||| || || || || |||| || || || ||||||||||| |
Sbjct 32679 CTACTTTATTAACTGCAACTTCAGTGTTTATCATCGCTTTTATCGCAGCACCTCCTGTTG 32620
Query 155096 ACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCT 155155
| || |||||||| ||||| || || ||||||| | | || || ||||||||||| |
Sbjct 32619 ATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCACTTTTATACGGAAACAACATCATTT 32560
Query 155156 CTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAG 155215
|||||||| || | |||| ||| |||||||| ||| | || ||||| |||||||||||||
Sbjct 32559 CTGGTGCTATTATTCCTACTTCTAACGCAATCGGTTTACATTTCTACCCTATTTGGGAAG 32500
Query 155216 CAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACT 155275
|||| ||||||| || ||||| ||||| |||||||||| ||||||| | || | || |
Sbjct 32499 CAGCTTCTCTTGACGAATGGTTATACAACGGTGGTCCTTACCAACTTATCGTTTGTCATT 32440
Query 155276 TCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCA 155335
|| | | |||||| | ||| |||||| |||||||| | |||| |||| | || |
Sbjct 32439 TCTTCTTAGGAATCTGTTCTTACATGGGTCGTGAGTGGGAATTATCTTTCCGTTTAGGTA 32380
Query 155336 TGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCC 155395
||||||| ||||| ||||| ||||| |||||||| |||| || |||||||||
Sbjct 32379 TGCGTCCATGGATTGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCAACAGCTGTATTCA 32320
Query 155396 TTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTA 155455
| | || || |||||||||||||||||||||||| |||||| | ||||| |||||||
Sbjct 32319 TCATCTACCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATTTCTGGTA 32260
Query 155456 CTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAA 155492
| ||||||| ||| |||| |||||||| || || ||
Sbjct 32259 CATTTAACTTCATGATCGTATTCCAAGCTGAGCATAA 32223
Score = 345 bits (382), Expect = 5e-90
Identities = 346/449 (77%), Gaps = 0/449 (0%)
Strand=Plus/Minus
Query 155491 AATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTT 155550
|| || || |||||||| ||||| ||||| || || || ||||| || ||||| || |
Sbjct 31300 AACATTCTAATGCACCCATTCCATATGCTAGGCGTTGCCGGTGTATTTGGTGGTTCATTA 31241
Query 155551 TTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAA 155610
||||||||||||||||||||| | || || ||||| ||||| |||||||| |||||| |
Sbjct 31240 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTCTAATTCGTGAAACAACTGAGAAC 31181
Query 155611 GAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCT 155670
|| || ||| | |||||||| ||||| ||||||||||||||||| ||||| |||||
Sbjct 31180 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 31121
Query 155671 GCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGT 155730
|||||||| |||||||||||| | || ||||| || || || || |||||||| |
Sbjct 31120 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATACGCTTCTTTTAACAACTCTCGTTCA 31061
Query 155731 CTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTG 155790
| || |||||| | ||||| ||||| || || | || ||| |||||| | ||| |
Sbjct 31060 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTTACTGCTTTAGGTATT 31001
Query 155791 TCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT 155850
||||| ||||| |||||| | || ||||||||||||||||| || || ||||| |
Sbjct 31000 TCAACTATGGCTTTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 30941
Query 155851 GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTA 155910
|| || || || ||||| |||||| | ||||| || |||||||||||||||
Sbjct 30940 GGCCGTGTTATTAACACTTGGGCTGACATTATCAACCGTGCCAACCTTGGTATGGAAGTA 30881
Query 155911 ATGCACGAGCGTAACGCTCACAACTTCCC 155939
||||| |||||||||||||||||||||||
Sbjct 30880 ATGCATGAGCGTAACGCTCACAACTTCCC 30852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 584808882416000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |