Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_021071.1
Length=177211
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 376 3e-99
>seq2029
Length=64692
Score = 376 bits (416), Expect = 3e-99
Identities = 375/485 (77%), Gaps = 6/485 (1%)
Strand=Plus/Plus
Query 67821 TTGTGCTCTGCTTGGAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATT 67880
|| ||||| |||||||| |||| |||| ||||||| |||||||||||||| | ||||||
Sbjct 32223 TTATGCTCAGCTTGGAATACGATCATGAAGTTAAATGTACCAGAAATACCTAAAGGCATA 32282
Query 67881 GCGTCAGAGAAAGAACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGAC 67940
| |||||||||||||||||||||| || |||| | ||| ||||| ||||||||
Sbjct 32283 CCATCAGAGAAAGAACCTTGACCGATTGGGTAGATGATGAATACAGCTGTTGCTGCAGCA 32342
Query 67941 ACTGGAGCAGAGTATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCC 68000
||||| || ||||| || || ||||| ||||||||||| | |||| |||| | ||||
Sbjct 32343 ACTGGTGCTGAGTAAGCAACTGCAATCCATGGACGCATACCTAAACGGAAAGATAATTCC 32402
Query 68001 CACTGACGACCACAGTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAA 68060
|||| |||||| ||| | |||||| | | ||| || | || | ||||||| ||
Sbjct 32403 CACTCACGACCCATGTAAGAACAGATTCCTAAGAAGAAATGACAAACGATAAGTTGGTAA 32462
Query 68061 GGTCCACCATTATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGA 68120
|| ||||| || || ||||| || || |||| ||||||||||| ||||| ||||| ||
Sbjct 32463 GGACCACCGTTGTATAACCATTCGTCAAGAGAAGCTGCTTCCCAAATAGGGTAGAAATGT 32522
Query 68121 AGACCGATTGCGTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATG 68180
| |||||||||||| ||| |||||| || ||||||||||||||||||||| ||||| |
Sbjct 32523 AAACCGATTGCGTTAGAAGTAGGAATAATAGCACCAGAAATGATGTTGTTTCCGTATAAA 32582
Query 68181 AGCGAACCTGCAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAAT 68240
|| ||||| | ||| || || | |||||||||||||||||| ||||||||||| || ||
Sbjct 32583 AGTGAACCAGAAACTGGCTCACGGATACCATCGATATCAACAGGAGGTGCTGCGATAAAA 32642
Query 68241 GCAATGATGAA---GCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAAC 68297
|| ||||| || ||||||| | | | || ||||||||| || ||||| |||
Sbjct 32643 GCGATGATAAACACTGAAGTTGCAGTT---AATAAAGTAGGAATCATTAATACACCAAAC 32699
Query 68298 CAACC 68302
|||||
Sbjct 32700 CAACC 32704
Score = 363 bits (402), Expect = 2e-95
Identities = 350/449 (78%), Gaps = 0/449 (0%)
Strand=Plus/Plus
Query 67374 GGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGTCCTGCTCTGTTAAGG 67433
||||||||||||||||||||||| ||||| |||||||| ||||| || | ||| |
Sbjct 30852 GGGAAGTTGTGAGCGTTACGCTCATGCATTACTTCCATACCAAGGTTGGCACGGTTGATA 30911
Query 67434 ATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGACGGATTGGTTGAAGTTG 67493
||||| |||||||| ||| || || || || || || |||||||||||||||
Sbjct 30912 ATGTCAGCCCAAGTGTTAATAACACGGCCTTGTGAATCTACAACTGATTGGTTGAAGTTG 30971
Query 67494 AAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGTGAACCAGATGCAGACC 67553
||||| || | |||||| ||||||||||| | ||| | ||||| ||||| || | ||
Sbjct 30972 AAACCATTTAAGTTGAAAGCCATAGTTGAAATACCTAAAGCAGTAAACCAAATACCAACA 31031
Query 67554 ACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAAGATGCATACTGG 67613
|| || | ||||| | |||||| || | | |||||||| ||||| || || |||
Sbjct 31032 ACTGGCCAAGCAGCTAAGAAGAAATGTAATGAACGAGAGTTGTTAAAAGAAGCGTATTGG 31091
Query 67614 AAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTAAGTCTCTTCTTCTTGT 67673
|| || || ||||||||||| |||||||| ||||| ||||||||||| |||||||||||
Sbjct 31092 AAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATGTTGTAAGTTTCTTCTTCTTGA 31151
Query 67674 CCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCTGATAAGAGAAGAA 67733
||||| |||||||| | ||| ||| || | |||||| ||||| | || |||||||||
Sbjct 31152 CCGAATTTGTAACCTTCGTTAGCTGATTCGTTCTCAGTTGTTTCACGAATTAGAGAAGAA 31211
Query 67734 GTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAATACACCTGCTACTCCA 67793
|| ||||| ||||||||||||||| || | ||||||||| |||||||| || || ||
Sbjct 31212 GTTACAAGTGAACCGTGCATAGCAGAGAATAATGAACCACCAAATACACCGGCAACGCCT 31271
Query 67794 AGCATATGGAATGGGTGCATAAGGATGTT 67822
|||||||||||||||||||| || |||||
Sbjct 31272 AGCATATGGAATGGGTGCATTAGAATGTT 31300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 566921687376000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |