Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_021530.1
Length=171407
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 576 2e-159
>seq2029
Length=64692
Score = 576 bits (638), Expect = 2e-159
Identities = 738/1009 (73%), Gaps = 6/1009 (1%)
Strand=Plus/Minus
Query 159306 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGACTACTACTTCTT 159365
|||||||||||| || || || || |||||||| || ||||| || |||| || ||
Sbjct 63366 GATGACTGGCTTCGTCGCGACCGTTTCGTTTTTGTAGGATGGTCAGGGTTACTT-TTATT 63308
Query 159366 CCC-ACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTG 159424
||| ||||| ||||| || |||| |||||| |||| || || | ||||| || |||
Sbjct 63307 CCCGACTGCATATCTTGCACTTGGTGGTTGGTTTACAGGAACTACATTTGTAACTTCTTG 63248
Query 159425 GTACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAACTTTCTCACAGCAGCTGT 159484
||| || || ||| | |||| ||| ||| | || || ||| || | || || || ||
Sbjct 63247 GTATACTCATGGTTTAGCTACTTCATATTTAGAAGGCTGTAATTTCTTAACTGCTGCGGT 63188
Query 159485 CTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCA 159544
|| || || || | ||||||||||||| | | | |||||||| || || ||||
Sbjct 63187 TTCTACTCCAGCAAATAGTATGGGTCATTCTTTATTATTTCTTTGGGGCCCAGAAGCTCA 63128
Query 159545 GGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGATTATGGAATTTTGTGGCACTCCACGG 159604
|| |||| || |||||||||||||| || | |||| ||| || || || |||||
Sbjct 63127 AGGTGATTTTACTCGTTGGTGCCAACTTGGAGGTCTTTGGACTTTCGTAGCCCTTCACGG 63068
Query 159605 TGCCTTCGCCCTAATTGGTTTCATGCTCCGTCAGTTTGAACTGGCACGTCTCATTGGTA- 159663
| | || | || |||||||| ||||| ||||| |||||| | || ||| ||| | |
Sbjct 63067 TTCTTTTTCACTGATTGGTTTTATGCTTCGTCAATTTGAAATTGCTCGT-TCAGTAAAAA 63009
Query 159664 TCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCC 159723
| ||||| || || || ||||| || |||| ||| ||| ||||||| || || ||||
Sbjct 63008 TTCGTCCATATAACGCGATTGCTTTTTCTGCTCCAATTTCTGTTTTCGTTTCTGTGTTCC 62949
Query 159724 TCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAA 159783
| || |||||||| ||||| || ||||||| || || || ||||| || || ||||
Sbjct 62948 TAATTTACCCATTAGGTCAATCAGGTTGGTTCTTTGCACCAAGTTTTGGTGTTGCGGCAA 62889
Query 159784 TCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACGTTAAATCCCTTCCATA 159843
| || | || | || || ||||||| || || |||||||| ||||| || |||||||
Sbjct 62888 TTTTCCGTTTTATCTTATTTTTTCAAGGCTTCCATAACTGGACTTTAAACCCTTTCCATA 62829
Query 159844 TGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTCAGTGCCATCCATGGCGTTACTG 159903
||||||| || |||||| ||||||| | || |||| | ||||| ||||| | |||||
Sbjct 62828 TGATGGGTGTAGCTGGTGTACTAGGAGCTGCGTTACTTTGCGCCATTCATGGTGCTACTG 62769
Query 159904 TAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCAA 159963
|||| |||||||| | ||||||||| || ||||| || || |||||| | |||
Sbjct 62768 TAGAAAACACACTTTTTGAAGATGGTGATGGTGCAAACACATTCCGTGCGTTTAACCCAA 62709
Query 159964 CTCAAGAGGAGGAGACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCG 160023
|||||| || || || ||||||||||| ||||| ||| | || ||||| || ||||| |
Sbjct 62708 CTCAAGCAGAAGAAACATACTCTATGGTAACTGCTAACAGATTTTGGTCTCAAATCTTTG 62649
Query 160024 GTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTCATGTTGTTTGTGCCTGTTATGG 160083
|| | || |||||||| || || ||| | || ||||| ||| | ||||| ||||| | |
Sbjct 62648 GTGTAGCTTTTTCTAATAAACGTTGGTTACACTTCTTTATGCTTTTTGTTCCTGTAACAG 62589
Query 160084 GTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTTAATCTT-CGTGCTTACGAT 160142
| ||||||| ||||||| | | || || ||| |||| ||| ||||||||||||
Sbjct 62588 GGCTTTGGATGAGTGCTATTGGTGTAGTAGGTCTAGCT-TTAAACTTACGTGCTTACGAT 62530
Query 160143 TTCGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAA 160202
||||| ||||| || | || |||||||||||||||||||| || ||||| ||||||
Sbjct 62529 TTCGTTTCACAAGAAATTCGCGCTGCAGAAGATCCAGAATTTGAAACTTTCTATACCAAA 62470
Query 160203 AACATCCTATTGAACGAAGGACTACGTGCATGGTTGGCACCTGCTGATCAACCCCATGAA 160262
|| ||||| || |||||||| | ||||| ||| |||| || ||||| || ||||||
Sbjct 62469 AATATCCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCAGCCTCATGAA 62410
Query 160263 AACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 160311
|| || | ||||| || || || || || | || ||||| |||||||
Sbjct 62409 AAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGCTCTTTAAT 62361
Score = 392 bits (434), Expect = 4e-104
Identities = 404/526 (77%), Gaps = 2/526 (0%)
Strand=Plus/Minus
Query 157579 TTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACT 157638
||| || |||||||| ||| || | ||||| | || |||||||||| || ||| |
Sbjct 32747 TTTTTGTGAGTGGGTTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATT 32688
Query 157639 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 157697
|||||||| ||| | || | ||||| || || || ||| |||| || |||| || |
Sbjct 32687 AATGATTCCTACTTTATTAACTGCAACT-TCAGTGTTTATCATCGCTTTTATCGCAGCAC 32629
Query 157698 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACA 157757
| ||||| || ||||| || |||||||| || || |||||||||| | || || ||||
Sbjct 32628 CTCCTGTTGATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCACTTTTATACGGAAACA 32569
Query 157758 ACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCA 157817
||||||| |||||||| || | || |||| |||||||| ||| | || ||||| || |
Sbjct 32568 ACATCATTTCTGGTGCTATTATTCCTACTTCTAACGCAATCGGTTTACATTTCTACCCTA 32509
Query 157818 TCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAG 157877
| |||||||| || || ||||| || ||| | || ||||||||||||| |||||| | |
Sbjct 32508 TTTGGGAAGCAGCTTCTCTTGACGAATGGTTATACAACGGTGGTCCTTACCAACTTATCG 32449
Query 157878 TATTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATACC 157937
| | ||| ||| || | || |||| | | |||||||| |||||||||||| | || | ||
Sbjct 32448 TTTGTCATTTCTTCTTAGGAATCTGTTCTTACATGGGTCGTGAGTGGGAATTATCTTTCC 32389
Query 157938 GTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTG 157997
||||||||||||| || ||||| || || || || || ||||| ||||||||| | |
Sbjct 32388 GTTTAGGTATGCGTCCATGGATTGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCAACAG 32329
Query 157998 CTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTA 158057
|||||||| || |||| || ||||||||||||||||||| |||| ||||||| | ||||
Sbjct 32328 CTGTATTCATCATCTACCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTA 32269
Query 158058 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAA 158103
| |||||||| ||||||| |||| | ||||||||||| || || ||
Sbjct 32268 TTTCTGGTACATTTAACTTCATGATCGTATTCCAAGCTGAGCATAA 32223
Score = 378 bits (418), Expect = 8e-100
Identities = 353/449 (79%), Gaps = 0/449 (0%)
Strand=Plus/Minus
Query 158102 AACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTT 158161
||||| || |||||||| ||||||||||| || ||||| || ||||| ||||| || |
Sbjct 31300 AACATTCTAATGCACCCATTCCATATGCTAGGCGTTGCCGGTGTATTTGGTGGTTCATTA 31241
Query 158162 TTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTCGTGAAACGACTGAAACA 158221
||||||||||||||||| || || ||||| || || |||||||||| ||||| |
Sbjct 31240 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTCTAATTCGTGAAACAACTGAGAAC 31181
Query 158222 GAGTCACAGAACTACGGTTACAAGTTCGGTCAAGAGGAAGAGACCTATAACATCGTCGCA 158281
|| ||| ||| | |||||||| ||||||||||| ||||| || || |||||||| |||
Sbjct 31180 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 31121
Query 158282 GCACATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCC 158341
|| |||||||||||||||||||| || |||||||||||||| || |||||||| |||||
Sbjct 31120 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATACGCTTCTTTTAACAACTCTCGTTCA 31061
Query 158342 TTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTC 158401
|| || |||||| | ||||| ||||| ||||| || || ||||| || || | || |
Sbjct 31060 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTTACTGCTTTAGGTATT 31001
Query 158402 TCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAG 158461
|| || ||||| |||||| | || ||||||||||||||||| || | | ||| ||
Sbjct 31000 TCAACTATGGCTTTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 30941
Query 158462 GGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTT 158521
|| ||||| | ||||| ||||| || | | ||||| || ||||||||||||||
Sbjct 30940 GGCCGTGTTATTAACACTTGGGCTGACATTATCAACCGTGCCAACCTTGGTATGGAAGTA 30881
Query 158522 ATGCATGAGCGTAACGCACACAACTTCCC 158550
||||||||||||||||| |||||||||||
Sbjct 30880 ATGCATGAGCGTAACGCTCACAACTTCCC 30852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548349723152000
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