Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3244 93.3 4e-14 >seq3244 Length=4747 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 24791 ATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAG 24850 || || ||||||||||| || || |||||||| || ||| | |||||||| || || ||| Sbjct 3100 ATTCAGGACAAAGAAGGCATCCCCCCCGATCAGCAGCGTCTCATCTTTGCGGGCAAGCAG 3159 Query 24851 CTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTG 24910 ||||||||| | | || | || || ||||| || ||||| || || | ||| || Sbjct 3160 CTGGAGGATGGCCGCACGCTGGCCGACTACAACATCCAGAAGGAGTCCACCTTGCACCTG 3219 Query 24911 GTGTTGCGATTGCGCGGAGGC 24931 ||| |||| |||| |||||| Sbjct 3220 GTGCTGCGCCTGCGAGGAGGC 3240 Score = 82.4 bits (90), Expect = 7e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 24794 CAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTG 24853 || |||||||| || || || |||||||| || || | ||||||||||| || |||||| Sbjct 3555 CAGGACAAAGAGGGCATCCCCCCCGATCAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTG 3614 Query 24854 GAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTG 24913 |||||| | | || | || || ||||| || ||||| || || | ||| ||||| Sbjct 3615 GAGGATGGCCGCACGCTGGCCGACTACAACATCCAGAAGGAGTCCACCTTGCACCTGGTG 3674 Query 24914 TTGCGATTGCGCGGAGGC 24931 |||| |||| || ||| Sbjct 3675 CTGCGCCTGCGAGGCGGC 3692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449877354608000