Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq3244 93.3 3e-14 >seq3244 Length=4747 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425 |||||||||||| | ||| ||||| || | || || | |||||| || ||||||||| Sbjct 3106 GACAAAGAAGGCATCCCCCCCGATCAGCAGCGTCTCATCTTTGCGGGCAAGCAGCTGGAG 3165 Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 |||| | | || |||| || |||||||| || || || || || |||||| ||||| | Sbjct 3166 GATGGCCGCACGCTGGCCGACTACAACATCCAGAAGGAGTCCACCTTGCACCTGGTGCTG 3225 Query 110486 AGACTGCGAGGGGG 110499 | |||||||| || Sbjct 3226 CGCCTGCGAGGAGG 3239 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425 |||||||| ||| | ||| ||||| || | || || | ||| || || ||||||||| Sbjct 3558 GACAAAGAGGGCATCCCCCCCGATCAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTGGAG 3617 Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 |||| | | || |||| || |||||||| || || || || || |||||| ||||| | Sbjct 3618 GATGGCCGCACGCTGGCCGACTACAACATCCAGAAGGAGTCCACCTTGCACCTGGTGCTG 3677 Query 110486 AGACTGCGAGGGGG 110499 | |||||||| || Sbjct 3678 CGCCTGCGAGGCGG 3691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412823486574800