Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq622 149 1e-29
seq3183 145 1e-28
seq1643 118 2e-20
seq2362 111 2e-18
seq2434 105 1e-16
seq538 105 1e-16
seq1467 102 1e-15
seq326 100 5e-15
seq232 96.9 5e-14
seq842 93.3 7e-13
seq498 89.7 8e-12
seq3285 86.0 1e-10
>seq622
Length=11311
Score = 149 bits (164), Expect = 1e-29
Identities = 181/242 (75%), Gaps = 6/242 (2%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||| ||||||| |||||| |||
Sbjct 687 TGAACTTGGTGACGGCCTTGGTGCCCTCGCTGACGGCGTGCTTGGCCAGCTCGCCGGGCA 628
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTG- 1485588
| ||||||||| |||||||||||||| | | | || || | || |||| || ||
Sbjct 627 GCACCAGGCGCACAGCGGTCTGGATCTCCC--GAGACG-TCAGGGTGGGCTTCTTGTTGA 571
Query 1485589 CGCGCC--AGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGT 1485646
|||| | || || | || ||||| | || || | | |||| || |||||||
Sbjct 570 CGCGGCTGAGCTGGGCAGCGGCGGTGGCAATCTTCTCAAACTGGTCGGCGATGAACGAGT 511
Query 1485647 TCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCT 1485706
| | ||| | ||| || ||| ||||||||| |||||||||||| |||||||||||||
Sbjct 510 TGAGGATTGCCATGGACTTGGAGGAGATGCCGGTGTCGGGGTGCACTTGCTTGAGCACCT 451
Query 1485707 TG 1485708
||
Sbjct 450 TG 449
>seq3183
Length=41426
Score = 145 bits (160), Expect = 1e-28
Identities = 179/242 (74%), Gaps = 6/242 (2%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||| ||||||||||| ||||| ||||||||| ||||||| |||||| |||
Sbjct 387 TGAACTTGGTCACGGCCTTGGTGCCCTCGCTTACGGCGTGCTTGGCCAGCTCGCCGGGCA 446
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCG---CTTGTTAG 1485586
| |||||||||||||||||||||||| | | | || || | || | |||||||
Sbjct 447 GCACCAGGCGCACGGCGGTCTGGATCTCCC--GAGACG-TCAGGGTGGGCTTCTTGTTAA 503
Query 1485587 TGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGT 1485646
||| || || | || ||||| | || || | | |||| || |||||||
Sbjct 504 CGCGGCTGAGCTGGGCAGCGGCGGTGGCAATCTTCTCAAACTGGTCGGCGATGAACGAGT 563
Query 1485647 TCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCT 1485706
| | ||| | ||| || ||| ||||||||| ||||||||||||||||||||||||||
Sbjct 564 TGAGGATGGCCATGGACTTGGAGGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCACCT 623
Query 1485707 TG 1485708
||
Sbjct 624 TG 625
>seq1643
Length=669
Score = 118 bits (130), Expect = 2e-20
Identities = 154/207 (74%), Gaps = 6/207 (3%)
Strand=Plus/Minus
Query 1485505 GCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTG 1485564
|||||| ||||||| |||||| ||| | ||||||||| |||||||||||||| ||||
Sbjct 669 GCGTGCTTGGCCAGCTCGCCGGGCAGCACCAGGCGCACAGCGGTCTGGATCTCCCGGGA- 611
Query 1485565 CCGATCGTGTTGCGCTTGTTAGTG-CGCGCCAG-GC-GGCCGGCCTCGGTGCCGATGCGG 1485621
|| || | || |||| || || |||| | | || || | || ||||| | ||
Sbjct 610 -CG-TCAGGGTGGGCTTCTTGTTGACGCGGCTGAGCTGGGCAGCGGCGGTGGCAATCTTC 553
Query 1485622 TCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACG 1485681
|| | | |||| || |||||||| | ||| | ||| || ||| ||||||||| |
Sbjct 552 TCAAACTGGTCGGCGATGAACGAGTTGAGGATGGCCATGGACTTGGAGGAGATGCCGGTG 493
Query 1485682 TCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||||||||||||||||||||||||||
Sbjct 492 TCGGGGTGCACCTGCTTGAGCACCTTG 466
>seq2362
Length=5612
Score = 111 bits (122), Expect = 2e-18
Identities = 79/91 (87%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||| ||||||| |||||| |||
Sbjct 115 TGAACTTGGTGACGGCCTTGGTGCCCTCGCTGACGGCGTGCTTGGCCAGCTCGCCGGGCA 56
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560
| |||||||||||||||||||||||| ||
Sbjct 55 GCACCAGGCGCACGGCGGTCTGGATCTCCCG 25
>seq2434
Length=50316
Score = 105 bits (116), Expect = 1e-16
Identities = 156/213 (73%), Gaps = 10/213 (5%)
Strand=Plus/Plus
Query 2019032 GGGCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCT-CTTGG 2019090
|||||| || ||||| ||||||||||| ||||| ||||||||| | || ||| || ||
Sbjct 14118 GGGCCCCCCAGGCACCGGCAAGACCACCAGCATTCTGTGCCTGGCCCACGAGCTGCTGGG 14177
Query 2019091 GCGCGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACG 2019150
|| | || ||| |||| ||||| || || |||||||| ||||| |||||| | || |
Sbjct 14178 GCCCAGCTTCCG-GGAGGGTGTGCTGGAGCTGAATGCGTCTGACGACCGCGGCATTGATG 14236
Query 2019151 TCGTGCGTAGAATCATCAAGCATCACGCTT-CG-AAAAGAA-TCGAC-CTGCCGCCCGGC 2019206
||||||| | | |||||| | | || || | |||| ||| |||||||| ||
Sbjct 14237 TCGTGCGCAACAAGATCAAG----ATGTTTGCGCAGCAGAAGGTGACGCTGCCGCCGGGG 14292
Query 2019207 CGCCACAAGGTGATCATCCTCGATGAGGCCGAC 2019239
|| || ||| | | ||||| |||||||| |||
Sbjct 14293 CGACAGAAGATTGTGATCCTGGATGAGGCAGAC 14325
Score = 87.8 bits (96), Expect = 3e-11
Identities = 90/115 (78%), Gaps = 2/115 (2%)
Strand=Plus/Plus
Query 2019254 GGCCCAGCAGGCCCTCCGATCG-ACCATGGAAAAGTACACCAACACGACGCGGTTTGCGC 2019312
|||||||||||| || || ||| |||||||| | ||| || ||| || || ||||||
Sbjct 14565 GGCCCAGCAGGCGCTGCG-TCGCACCATGGAGATCTACTCCTCCACCACTCGCTTTGCGT 14623
Query 2019313 TGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCAT 2019367
||||||||||||| || || | |||| || || |||||||||| ||||||||
Sbjct 14624 TGGCCTGCAACACATCCTCCAAAATCATTGAGCCCATCCAGAGCCGCTGCGCCAT 14678
>seq538
Length=19016
Score = 105 bits (116), Expect = 1e-16
Identities = 123/164 (75%), Gaps = 4/164 (2%)
Strand=Plus/Minus
Query 794503 ATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGA 794562
||||||||||| ||||| | ||||| || | |||| |||||||| || |||||| ||
Sbjct 16496 ATCCACTTCATTGCCCAGTGCGCCTTCTTGCGCACCACAGGCACCGTCTCCATGGCGTGA 16437
Query 794563 AAGAGGTGGTCCTTCTCGACCGG--GTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGG 794620
|| || | |||||||| | || |||||||| ||| || || | || | |||
Sbjct 16436 AACAGCTTCTCCTTCTC--CTGGCTGTCCTTGATGTACGTCTCCAGAAGCAAGCTGTACA 16379
Query 794621 TCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAG 794664
|||| ||||||||||| || ||||| ||||||||||| || |||
Sbjct 16378 TCTCGGAGTGGATGTTCTCAATGGCAATCTGGAAGCCGTAGAAG 16335
Score = 104 bits (114), Expect = 4e-16
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 793950 AGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCG 794009
|||||||||| |||||||| || ||||||||| | ||| ||||| | ||
Sbjct 17300 AGCGAGATCATGTCCATCCAGTCAAAGGGGTTGGCCATGTTGTACTGCTTGGGGTTGCCC 17241
Query 794010 AGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069
|||| | | ||||| ||||| || ||| ||||||||||| | ||| || | ||||
Sbjct 17240 AGCGCCACTAGCAGCCGGTCCGCACAGAACTCAATGTACTGCCCCATCAGCACCTTGTTC 17181
Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
|||||||| | |||||||||||| || | || |||||| |||||||| | || |||
Sbjct 17180 ATGCCGATCAAATCCACGGGCAGCGCGTCACAGATAAACTCCTTCTCGATGGCAACCGCC 17121
Query 794130 TC 794131
||
Sbjct 17120 TC 17119
Score = 98.7 bits (108), Expect = 2e-14
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|||||||| ||| || | ||||| |||| ||||||||||||||| || ||||||
Sbjct 16851 CCTTCGTCACGAGAAATGAGCTCGTTTGAAAAGGTGAGGCCGGGCATGAGCCCTCGCTTC 16792
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
|||||||| ||||||| ||||| ||| ||||| ||||||||||| ||| |||||
Sbjct 16791 TTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAGATGCCCTCCACGCAAGCAAA 16733
Score = 89.7 bits (98), Expect = 8e-12
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 796151 CCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCGT 796210
|||| || | || ||||||| |||||| ||| || |||||||||| ||||||||||
Sbjct 16072 CCTCTGGGATCTGCACCTCCTGCATGAACCGGGCGCCCAGGTTCTCGTTGACGATGCCGT 16013
Query 796211 CGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269
| ||| ||||| || ||||| ||||| | |||||| ||||||||||||||||
Sbjct 16012 CTGAGGCCGCGAAGAAAGCGAGAACGTGAGACACAAAGTGCTTCTCGTCGTCGCTGAGC 15954
>seq1467
Length=668
Score = 102 bits (112), Expect = 1e-15
Identities = 77/91 (85%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||| ||||||||||| ||||| |||||| ||| ||||||| |||||| |||
Sbjct 97 TGAACTTGGTCACGGCCTTGGTGCCCTCGCTGACGGCATGCTTGGCCAGCTCGCCGGGCA 38
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560
| |||||||||||||||||||||||| ||
Sbjct 37 GCACCAGGCGCACGGCGGTCTGGATCTCCCG 7
>seq326
Length=80286
Score = 100 bits (110), Expect = 5e-15
Identities = 117/158 (74%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 2073559 GTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGACTCGCCGTTGGTGCCCGCC 2073618
||||| ||||| ||||| ||||||||||| | ||||||||| |||||| |||||
Sbjct 59707 GTGTCATTAAACACGCGCAGCATGGGCACGATGCCGTTGGATGTGCCGTTAGTGCCGCGG 59766
Query 2073619 ACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCGATGCCGCCGGCCGCCTTG 2073678
| ||| | ||| | |||||| | |||||| | | ||| ||||||||||| | ||||
Sbjct 59767 ATGTACGAGCCGGTGGCGCGAATGTTGTGCATTGACAGGCCAATGCCGCCGGCAGACTTG 59826
Query 2073679 GAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716
|| || || |||| || ||||| || ||||||||
Sbjct 59827 GAAATACCTGCACACTCCTTGAGCGTATCATAGATGCC 59864
>seq232
Length=39391
Score = 96.9 bits (106), Expect = 5e-14
Identities = 77/93 (83%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| ||| |||||| | ||||| |||||| |||
Sbjct 4707 TGTACTTGGTGACTGCCTTGGTGCCCTCGCTGACAGCGTGCTTTGCCAGCTCGCCGGGCA 4766
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562
| ||||||||||| ||||||||||| ||||
Sbjct 4767 GCACGAGGCGCACGGCAGTCTGGATCTCCCGGG 4799
>seq842
Length=68087
Score = 93.3 bits (102), Expect = 7e-13
Identities = 75/91 (82%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| ||| |||||| ||| ||| || || |||
Sbjct 17849 TGAACTTGGTGACGGCCTTGGTGCCCTCGCTGACTGCGTGCTTGGACAGCTCTCCTGGCA 17790
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560
||| |||||||| |||||||||||||| ||
Sbjct 17789 GGATGAGGCGCACAGCGGTCTGGATCTCACG 17759
>seq498
Length=39311
Score = 89.7 bits (98), Expect = 8e-12
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 429632 CACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGA 429691
||||||||| ||||||||| || || | ||||||||||||||||||||||||||||
Sbjct 25897 CACCTTCCGCCTCAACCTGAGTGTCACCTCCCCCTACAACGCCGACTTTGACGGCGACGA 25956
Query 429692 GATGAACCTGCACGTGCCCCAG 429713
||||||| ||||| || | |||
Sbjct 25957 GATGAACATGCACATGGCGCAG 25978
>seq3285
Length=63365
Score = 86.0 bits (94), Expect = 1e-10
Identities = 144/209 (69%), Gaps = 6/209 (3%)
Strand=Plus/Minus
Query 794380 CCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAG 794439
|| |||||||| |||||||| ||||| ||||| | |||||| ||| ||||| |
Sbjct 18867 CCAGGCATGAGCTGCCGCTTCTTCAGCCAGAAGATCGAGCAGAAAGAGCCAGAGAAGTGG 18808
Query 794440 ATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTG 794499
|||||||| || || || |||| |||||||| ||||| | || ||||
Sbjct 18807 ATGCCCTCCACACACGCGTAGGCGACAAGCCGCTCTGCAAAGCAGCTGCTGCTCTCT--- 18751
Query 794500 TTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCG 794559
||||||||||||||||||| ||||| ||| || |||| | ||||| | |||
Sbjct 18750 ---ATCCACTTCATCGCCCACTGCGCCTTCTTCTGTACGCAGGGAATGGTGTCCACCGCG 18694
Query 794560 CGAAAGAGGTGGTCCTTCTCGACCGGGTC 794588
| ||||| |||| || || |||||
Sbjct 18693 TGGAAGAGCATGTCCCGCTGCACTGGGTC 18665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915863451580400
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