Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq3244 104 2e-17
seq3143 102 7e-17
>seq3244
Length=4747
Score = 104 bits (114), Expect = 2e-17
Identities = 115/153 (75%), Gaps = 4/153 (3%)
Strand=Plus/Plus
Query 107649 GATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAG 107708
|| ||||||||| | ||| ||||||||| | || || | |||||| || |||||||||
Sbjct 3106 GACAAAGAAGGCATCCCCCCCGATCAGCAGCGTCTCATCTTTGCGGGCAAGCAGCTGGAG 3165
Query 107709 GACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768
|| | | || |||| ||||||||||| || |||||||| || |||||| ||||| ||
Sbjct 3166 GATGGCCGCACGCTGGCCGACTACAACATCCAGAAGGAGTCCACCTTGCACCTGGTGCTG 3225
Query 107769 AGATTGCGAGGGGGAAATAATAAAAATATTTGT 107801
| ||||||| || || ||||||||||
Sbjct 3226 CGCCTGCGAGGAGG----CATGCAAATATTTGT 3254
Score = 93.3 bits (102), Expect = 3e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 107649 GATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAG 107708
|| ||||| ||| | ||| ||||||||| | || || | ||| || || |||||||||
Sbjct 3558 GACAAAGAGGGCATCCCCCCCGATCAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTGGAG 3617
Query 107709 GACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768
|| | | || |||| ||||||||||| || |||||||| || |||||| ||||| ||
Sbjct 3618 GATGGCCGCACGCTGGCCGACTACAACATCCAGAAGGAGTCCACCTTGCACCTGGTGCTG 3677
Query 107769 AGATTGCGAGGGGG 107782
| ||||||| ||
Sbjct 3678 CGCCTGCGAGGCGG 3691
>seq3143
Length=13185
Score = 102 bits (112), Expect = 7e-17
Identities = 98/126 (78%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 107657 AGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAA 107716
|||| | ||| || |||||| | || || | |||||| || ||||||||||||| |
Sbjct 6996 AGGCATCCCCCCTGACCAGCAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCG 7055
Query 107717 AACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCG 107776
||| |||||||||||||||| || |||||||| ||| ||||| |||||||| | ||||
Sbjct 7056 CACACTGGCGGACTACAACATCCAGAAGGAGTCCACGCTGCACCTGGTGTTGCGCCTGCG 7115
Query 107777 AGGGGG 107782
|| ||
Sbjct 7116 CGGAGG 7121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398859299280400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |