Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_023587.1
Length=189311
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 567 9e-157
>seq2029
Length=64692
Score = 567 bits (628), Expect = 9e-157
Identities = 743/1018 (73%), Gaps = 8/1018 (1%)
Strand=Plus/Minus
Query 178938 GTTCGATGTCTTGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGG 178997
||| ||||| | |||||||||||| ||| || || || || ||||| || ||||| ||
Sbjct 63379 GTTTGATGTTGTTGATGACTGGCTTCGTCGCGACCGTTTCGTTTTTGTAGGATGGTCAGG 63320
Query 178998 ACTCCTACTTCTTCCC-ACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTT 179056
| || || ||||| ||||| |||||||| |||| |||||| |||| || || | |
Sbjct 63319 GTTACTT-TTATTCCCGACTGCATATCTTGCACTTGGTGGTTGGTTTACAGGAACTACAT 63261
Query 179057 TTGTTACGAGTTGGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTC 179116
|||| || |||||| || |||||| | |||| ||| ||| | ||||| ||| ||||
Sbjct 63260 TTGTAACTTCTTGGTATACTCATGGTTTAGCTACTTCATATTTAGAAGGCTGTAA-TTTC 63202
Query 179117 TTA-CGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGG 179175
||| | || || || || || || || || ||||||||||||| | | | ||||||
Sbjct 63201 TTAACTGCTGCGGTTTCTACTCCAGCAAATAGTATGGGTCATTCTTTATTATTTCTTTGG 63142
Query 179176 GGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTC 179235
|| || || |||| || |||| || |||||||||||||| || || |||| ||||
Sbjct 63141 GGCCCAGAAGCTCAAGGTGATTTTACTCGTTGGTGCCAACTTGGAGGTCTTTGGACTTTC 63082
Query 179236 GTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCA 179295
|| || || |||||| | || | || ||||| || ||||||||||| |||||| | ||
Sbjct 63081 GTAGCCCTTCACGGTTCTTTTTCACTGATTGGTTTTATGCTTCGTCAATTTGAAATTGCT 63022
Query 179296 CGTCTCA-TCGGTATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATT 179354
||| ||| | || ||||| || || |||||||||||| ||| ||| ||| | || ||
Sbjct 63021 CGT-TCAGTAAAAATTCGTCCATATAACGCGATTGCTTTTTCTGCTCCAATTTCTGTTTT 62963
Query 179355 CGTTAGTGTATTTCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTT 179414
|||| ||| || || || |||||| | || ||||| ||||||||||||| ||| ||
Sbjct 62962 CGTTTCTGTGTTCCTAATTTACCCATTAGGTCAATCAGGTTGGTTCTTTGCACCAAGTTT 62903
Query 179415 TGGTGTTGCGGCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACT 179474
|||||||||||| || || | || | | || || ||||| ||||| |||||||| |
Sbjct 62902 TGGTGTTGCGGCAATTTTCCGTTTTATCTTATTTTTTCAAGGCTTCCATAACTGGACTTT 62843
Query 179475 CAACCCCTTTCACATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTAT 179534
||||| || || |||||||| || || ||| | || || | ||| | || | || ||
Sbjct 62842 AAACCCTTTCCATATGATGGGTGTAGCTGGTGTACTAGGAGCTGCGTTACTTTGCGCCAT 62783
Query 179535 TCATGGAGTAACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAA 179594
|||||| | |||||||| || ||| | | ||||||||| || |||||||||||
Sbjct 62782 TCATGGTGCTACTGTAGAAAACACACTTTTTGAAGATGGTGATGGTGCAAACACATTCCG 62723
Query 179595 AGCGTTCGACTCTACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTG 179654
||||| || | || |||| || || || || |||||||| || || ||| | |||||
Sbjct 62722 TGCGTTTAACCCAACTCAAGCAGAAGAAACATACTCTATGGTAACTGCTAACAGATTTTG 62663
Query 179655 GTCGCAGATCTTCGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTT 179714
||| || ||||| || || | ||| ||||| |||||||| |||||||||| ||| ||
Sbjct 62662 GTCTCAAATCTTTGGTGTAGCTTTTTCTAATAAACGTTGGTTACACTTCTTTATGCTTTT 62603
Query 179715 TGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCT 179774
||||||||| | || |||||| | | ||||||| | | || |||||| |||| ||
Sbjct 62602 TGTTCCTGTAACAGGGCTTTGGATGAGTGCTATTGGTGTAGTAGGTCTAGCT-TTAAACT 62544
Query 179775 T-CGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGA 179833
| |||||||| ||||| || ||||| || | || ||||||||||| || || || |
Sbjct 62543 TACGTGCTTACGATTTCGTTTCACAAGAAATTCGCGCTGCAGAAGATCCAGAATTTGAAA 62484
Query 179834 CGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTG 179893
| |||||||| || || || ||| | || ||||| | ||||||||| |||| || |
Sbjct 62483 CTTTCTATACCAAAAATATCCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAG 62424
Query 179894 ATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951
|||| || |||||||| | | ||||| || || || |||| |||| ||||| ||
Sbjct 62423 ATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGCTCT 62366
Score = 358 bits (396), Expect = 8e-94
Identities = 396/525 (75%), Gaps = 2/525 (0%)
Strand=Plus/Minus
Query 177558 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177617
|| || |||||||| ||| || | ||||| | || |||||||||| || ||| |
Sbjct 32746 TTTTGTGAGTGGGTTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATTA 32687
Query 177618 ATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCC 177676
|||||||| ||| | || | |||||| || | || ||| |||| || |||| || ||
Sbjct 32686 ATGATTCCTACTTTATTAACTGCAACT-TCAGTGTTTATCATCGCTTTTATCGCAGCACC 32628
Query 177677 CCCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 177736
|| || || ||||| || |||||||| || || |||||||||| | || || |||||
Sbjct 32627 TCCTGTTGATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCACTTTTATACGGAAACAA 32568
Query 177737 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 177796
|||||| |||||||| || | || |||| |||||||| ||| | || ||||| || ||
Sbjct 32567 CATCATTTCTGGTGCTATTATTCCTACTTCTAACGCAATCGGTTTACATTTCTACCCTAT 32508
Query 177797 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 177856
|||||||| || || ||||| || ||| | || ||||||||||||| |||||| | ||
Sbjct 32507 TTGGGAAGCAGCTTCTCTTGACGAATGGTTATACAACGGTGGTCCTTACCAACTTATCGT 32448
Query 177857 CTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCG 177916
| ||| ||| | | || |||| | | || ||||| |||||||||||| | || | |||
Sbjct 32447 TTGTCATTTCTTCTTAGGAATCTGTTCTTACATGGGTCGTGAGTGGGAATTATCTTTCCG 32388
Query 177917 TCTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGC 177976
| |||||||||| || ||||| ||||| ||||| ||||| ||||| |||||| | ||
Sbjct 32387 TTTAGGTATGCGTCCATGGATTGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCAACAGC 32328
Query 177977 AGTCTTTCTAGTCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTAT 178036
|| || | |||| || ||||||||||||| ||||| |||| ||||||| | |||||
Sbjct 32327 TGTATTCATCATCTACCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTAT 32268
Query 178037 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAA 178081
|||||||| ||||||| |||| | ||||||||||| || || ||
Sbjct 32267 TTCTGGTACATTTAACTTCATGATCGTATTCCAAGCTGAGCATAA 32223
Score = 320 bits (354), Expect = 2e-82
Identities = 346/457 (76%), Gaps = 1/457 (0%)
Strand=Plus/Minus
Query 178080 AATATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTT 178139
|| || || |||||||| ||||| ||||| || ||||| || ||||| ||||| || |
Sbjct 31300 AACATTCTAATGCACCCATTCCATATGCTAGGCGTTGCCGGTGTATTTGGTGGTTCATTA 31241
Query 178140 TTCTCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAAACT 178199
|||||||||||||| || || || |||||||| || | ||||| || || || |
Sbjct 31240 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTCTAATTCGTGAAACAACTGAGAAC 31181
Query 178200 GAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGTCGCA 178259
|| || ||| | |||||||| ||||| |||||||||||||| || |||||||| |||
Sbjct 31180 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 31121
Query 178260 GCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCGTTCAACAACTCCCGTTCA 178319
|| ||||| |||||||||||||| || |||||||| || || || |||||||| ||||||
Sbjct 31120 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATACGCTTCTTTTAACAACTCTCGTTCA 31061
Query 178320 CTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGGTGTA 178379
| || |||||| | || || ||||| || ||||| || ||||| || || | ||| |
Sbjct 31060 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTTACTGCTTTAGGTATT 31001
Query 178380 TCCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAA 178439
|| || ||||| || ||| | ||||| |||||||||||||| || | | || ||||
Sbjct 31000 TCAACTATGGCTTTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 30941
Query 178440 GGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTC 178499
|| ||||| | ||||| ||||| ||| | ||||||||||| || || ||||||||
Sbjct 30940 GGCCGTGTTATTAACACTTGGGCTGACATTATCAACCGTGCCAACCTTGGTATGGAAGTA 30881
Query 178500 ATGCACGAAAGAAATAGCACATAACTTCCCGCTTGAT 178536
||||| || | || || || ||||||||| | |||
Sbjct 30880 ATGCATGAGCGTAA-CGCTCACAACTTCCCGTTAGAT 30845
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 605639944976000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |