Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq2029 327 3e-85 >seq2029 Length=64692 Score = 327 bits (362), Expect = 3e-85 Identities = 344/450 (76%), Gaps = 2/450 (0%) Strand=Plus/Minus Query 29155 AACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTA 29214 |||||||| |||||||| ||||| ||||| |||||||| || || || ||||| || || Sbjct 31300 AACATTCTAATGCACCCATTCCATATGCTAGGCGTTGCCGGTGTATTTGGTGGTTCATTA 31241 Query 29215 TTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTGCGTGAGACGACTGAAGAC 29274 || ||| ||||||||||| ||||| || || || || | ||||| || ||||| || Sbjct 31240 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTCTAATTCGTGAAACAACTGAGAAC 31181 Query 29275 ATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCC 29334 || ||| | |||||||| || || ||||||||||| ||||| |||||||| || Sbjct 31180 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 31121 Query 29335 GCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCT 29394 ||||| || ||||| || ||||| || |||||||| |||||||| || || ||||| Sbjct 31120 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATACGCTTCTTTTAACAACTCTCGTTCA 31061 Query 29395 CTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTT 29454 |||| |||||| | ||||| ||||| || || || |||||||| |||| || || || Sbjct 31060 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTTACTGCTTTAGGTATT 31001 Query 29455 TCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACA-ACAA 29513 || || ||||| || || | || ||||| ||||| ||||| || || | || |||| Sbjct 31000 TCAACTATGGCTTTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 30941 Query 29514 TGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGT 29573 || ||||| ||||| ||||||||||| || |||| || || ||||| || | ||||| Sbjct 30940 -GGCCGTGTTATTAACACTTGGGCTGACATTATCAACCGTGCCAACCTTGGTATGGAAGT 30882 Query 29574 AATGCATGAGCGTAATGCTCATAACTTCCC 29603 ||||||||||||||| ||||| |||||||| Sbjct 30881 AATGCATGAGCGTAACGCTCACAACTTCCC 30852 Score = 255 bits (282), Expect = 2e-63 Identities = 385/542 (71%), Gaps = 4/542 (1%) Strand=Plus/Minus Query 28617 TAACCCTTGGGAGCTTTTTACTAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGG 28676 || || ||||| | |||| | | ||||| ||| || | |||||| | || | || Sbjct 32762 TAGCCTTTGGGCTCGTTTTTGTGAGTGGGTTACTAGCACTGAAAACCGTTTATACATCGG 32703 Query 28677 GTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTG 28735 |||||||| | | |||||||| | | | | || || || | || || || | Sbjct 32702 TTGGTTTGGTGTATTAATGATTCCTACTTTATTAACTGCAACT-TCAGTGTTTATCATCG 32644 Query 28736 CATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGAACCTGTCGCTGGAAGTC 28795 | || || || ||||| || ||||| || ||||| ||||| || || || |||| | Sbjct 32643 CTTTTATCGCAGCACCTCCTGTTGATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCAC 32584 Query 28796 TTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAGCAGCAATGCCATCGGAC 28855 || | || |||||||||||||| || || || | | || | || || ||||| Sbjct 32583 TTTTATACGGAAACAACATCATTTCTGGTGCTATTATTCCTACTTCTAACGCAATCGGTT 32524 Query 28856 TACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGAC 28915 |||| |||||||| ||||||||||| ||| ||||| |||||| | |||||||| || | Sbjct 32523 TACATTTCTACCCTATTTGGGAAGCAGCTTCTCTTGACGAATGGTTATACAACGGTGGTC 32464 Query 28916 CGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGT 28975 | | ||||||| | || | || ||| || | || ||| | |||||||||| || |||| Sbjct 32463 CTTACCAACTTATCGTTTGTCATTTCTTCTTAGGAATCTGTTCTTACATGGGTCGTGAGT 32404 Query 28976 GGGAACTTAGCTATC-GACTAGGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCC 29034 ||||| ||| || || | |||| ||| | || |||||| || || |||||||| || Sbjct 32403 GGGAA-TTATCTTTCCGTTTAGGTATGCGTCCATGGATTGCAGTTGCTTACTCAGCACCA 32345 Query 29035 GTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGAC 29094 || || || ||| | || || ||| || |||||||| |||||||||||||||| || Sbjct 32344 GTTGCTGCAGCAACAGCTGTATTCATCATCTACCCAATCGGTCAAGGTTCTTTCTCTGAT 32285 Query 29095 GCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACAT 29154 | |||||||| |||||||| || || || |||| |||| | || |||||||| || ||| Sbjct 32284 GGTATGCCTTTAGGTATTTCTGGTACATTTAACTTCATGATCGTATTCCAAGCTGAGCAT 32225 Query 29155 AA 29156 || Sbjct 32224 AA 32223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146659330045600