Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1700 100 3e-16 >seq1700 Length=6914 Score = 100 bits (110), Expect = 3e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 146994 CACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAG 147053 ||| |||||||||||| | ||||| || |||||| || ||||||||||| || ||||| Sbjct 1057 CACCTGGGCCACCATGCACGTGAGGAGGGAGTAGGAAGCGATGTTGAAGGGCACACCCAG 1116 Query 147054 GCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAA 147113 |||| ||| | ||||| ||| |||| ||| || ||||| ||||| ||||| || || Sbjct 1117 ACCCAGGTCGCACGACCGCTGATACATCTGACAACTCAGCTCGCCGTCTGCCACATAGAA 1176 Query 147114 CTG 147116 ||| Sbjct 1177 CTG 1179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583461743040000