Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq3244 113 5e-20
seq3143 98.7 1e-15
>seq3244
Length=4747
Score = 113 bits (124), Expect = 5e-20
Identities = 109/140 (78%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||||| || |||| ||| ||||| | ||||| ||||| || |||||||||||| |
Sbjct 3239 CCTCCTCGCAGGCGCAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 3180
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| ||||| ||||| || | ||||||||||||||| ||
Sbjct 3179 AGCGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGATCGGGGGGG 3120
Query 134607 ATGCCTTCTTTTTCTTGAAT 134626
||||||||||| || |||||
Sbjct 3119 ATGCCTTCTTTGTCCTGAAT 3100
Score = 95.1 bits (104), Expect = 1e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||| || |||| ||| ||||| | ||||| ||||| || |||||||||||| |
Sbjct 3691 CCGCCTCGCAGGCGCAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 3632
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| ||||| ||||| || | |||||||||||||| ||
Sbjct 3631 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCGGGGGGG 3572
Query 134607 ATGCCTTCTTTTTCTTG 134623
||||| ||||| || ||
Sbjct 3571 ATGCCCTCTTTGTCCTG 3555
>seq3143
Length=13185
Score = 98.7 bits (108), Expect = 1e-15
Identities = 101/129 (78%), Gaps = 6/129 (5%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCC 134545
||||| | || |||||||| ||||| |||||||| ||||| || |||||||||| ||||
Sbjct 7121 CCTCCGCGCAGGCGCAACACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCC 7062
Query 134546 AACGGTGTGAG--AGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603
| ||||| | ||| || ||||| ||||| ||||| |||| |||||||| || ||
Sbjct 7061 A---GTGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGG 7005
Query 134604 GGTATGCCT 134612
|| ||||||
Sbjct 7004 GGGATGCCT 6996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505375657072000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |