Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_026926.1
Length=192108
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 536 1e-147
>seq2029
Length=64692
Score = 536 bits (594), Expect = 1e-147
Identities = 734/1017 (72%), Gaps = 6/1017 (1%)
Strand=Plus/Minus
Query 182360 GTTCGATGTCCTGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGG 182419
||| ||||| | || |||||| || || || || || || ||||| || ||||| ||
Sbjct 63379 GTTTGATGTTGTTGATGACTGGCTTCGTCGCGACCGTTTCGTTTTTGTAGGATGGTCAGG 63320
Query 182420 ACTCCTACTTCTTCCC-ACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTT 182478
| || || ||||| ||||| |||||||| |||| |||||| |||| || || | |
Sbjct 63319 GTTACTT-TTATTCCCGACTGCATATCTTGCACTTGGTGGTTGGTTTACAGGAACTACAT 63261
Query 182479 TTGTTACGAGTTGGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTC 182538
|||| || |||||| || || ||| | ||| |||| ||| | ||||| ||| ||||
Sbjct 63260 TTGTAACTTCTTGGTATACTCATGGTTTAGCTACTTCATATTTAGAAGGCTGTAA-TTTC 63202
Query 182539 TTA-CGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGG 182597
||| | || || || || || || || || ||||||||||||| | | | ||||||
Sbjct 63201 TTAACTGCTGCGGTTTCTACTCCAGCAAATAGTATGGGTCATTCTTTATTATTTCTTTGG 63142
Query 182598 GGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTC 182657
|| || || |||| || |||| || |||||||||||||| || || |||| ||||
Sbjct 63141 GGCCCAGAAGCTCAAGGTGATTTTACTCGTTGGTGCCAACTTGGAGGTCTTTGGACTTTC 63082
Query 182658 GTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCT 182717
|| || || |||||| | || | || |||||||| |||||| | ||||||||| |||||
Sbjct 63081 GTAGCCCTTCACGGTTCTTTTTCACTGATTGGTTTTATGCTTCGTCAATTTGAAATTGCT 63022
Query 182718 CGCCTGATTGGAATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTC 182777
|| | ||| | || || || |||||||||||||||| ||| ||| |||| |||
Sbjct 63021 CGTTCAGTAAAAATTCGTCCATATAACGCGATTGCTTTTTCTGCTCCAATTTCTGTTTTC 62962
Query 182778 GTCAGTGTGTTCCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTT 182837
|| ||||||||| || || || || || || || |||||| || || || |||
Sbjct 62961 GTTTCTGTGTTCCTAATTTACCCATTAGGTCAATCAGGTTGGTTCTTTGCACCAAGTTTT 62902
Query 182838 GGTGTCGCGGCGATCTTCAGGTTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTC 182897
||||| ||||| || ||| | || | || || |||| || ||||| |||||||| |
Sbjct 62901 GGTGTTGCGGCAATTTTCCGTTTTATCTTATTTTTTCAAGGCTTCCATAACTGGACTTTA 62842
Query 182898 AACCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATC 182957
||||| |||||||||||||| || |||||| |||| || | || | || | || ||
Sbjct 62841 AACCCTTTCCATATGATGGGTGTAGCTGGTGTACTAGGAGCTGCGTTACTTTGCGCCATT 62782
Query 182958 CATGGTGTCACAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAA 183017
||||||| || ||||| || || | | ||||||||| || |||||||||||
Sbjct 62781 CATGGTGCTACTGTAGAAAACACACTTTTTGAAGATGGTGATGGTGCAAACACATTCCGT 62722
Query 183018 GCGTTCGATTCCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGG 183077
||||| | | ||||| | || || || || || ||||| || || || | ||||||
Sbjct 62721 GCGTTTAACCCAACTCAAGCAGAAGAAACATACTCTATGGTAACTGCTAACAGATTTTGG 62662
Query 183078 TCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTT 183137
|| |||||||| || || || ||| ||||| |||||||| |||||||||||| | |||
Sbjct 62661 TCTCAAATCTTTGGTGTAGCTTTTTCTAATAAACGTTGGTTACACTTCTTTATGCTTTTT 62602
Query 183138 GTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTT 183197
|||||||| | || |||||| | | ||||||| | | || || ||| |||| |||
Sbjct 62601 GTTCCTGTAACAGGGCTTTGGATGAGTGCTATTGGTGTAGTAGGTCTAGCT-TTAAACTT 62543
Query 183198 -CGTGCTTATGATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGAC 183256
|||||||| ||||| || ||||| ||| | || ||||||||||| || || || ||
Sbjct 62542 ACGTGCTTACGATTTCGTTTCACAAGAAATTCGCGCTGCAGAAGATCCAGAATTTGAAAC 62483
Query 183257 GTTCTACACAAAGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGA 183316
||||| || || || |||||| | || ||||| | ||||||||| |||| || ||
Sbjct 62482 TTTCTATACCAAAAATATCCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGA 62423
Query 183317 TCAACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373
||| || |||||||| | | |||||||| || ||| |||| | || ||||| ||
Sbjct 62422 TCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGCTCT 62366
Score = 374 bits (414), Expect = 1e-98
Identities = 400/526 (76%), Gaps = 2/526 (0%)
Strand=Plus/Minus
Query 180980 TTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACT 181039
||| || |||||||| ||| || | ||||| | || |||||||||| || ||| |
Sbjct 32747 TTTTTGTGAGTGGGTTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATT 32688
Query 181040 GATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 181098
|||||||| ||| | || | |||||| || || || ||| |||| || |||| || |
Sbjct 32687 AATGATTCCTACTTTATTAACTGCAACT-TCAGTGTTTATCATCGCTTTTATCGCAGCAC 32629
Query 181099 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACA 181158
| ||||| || ||||| || |||||||| || || |||||||||| | || || ||||
Sbjct 32628 CTCCTGTTGATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCACTTTTATACGGAAACA 32569
Query 181159 ACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCA 181218
||||||| |||||||| || |||| |||| |||||||| ||| | || ||||| || |
Sbjct 32568 ACATCATTTCTGGTGCTATTATTCCTACTTCTAACGCAATCGGTTTACATTTCTACCCTA 32509
Query 181219 TCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAG 181278
| |||||||| || || ||||| || ||| | || ||||||||||||| |||||| | |
Sbjct 32508 TTTGGGAAGCAGCTTCTCTTGACGAATGGTTATACAACGGTGGTCCTTACCAACTTATCG 32449
Query 181279 TCTTTCACTTCCTTATCGGCATTTATGCATACATGGGACGTGAATGGGAACTCTCTTACC 181338
| | ||| ||| | | || || | | | |||||||| ||||| |||||| | |||| ||
Sbjct 32448 TTTGTCATTTCTTCTTAGGAATCTGTTCTTACATGGGTCGTGAGTGGGAATTATCTTTCC 32389
Query 181339 GCTTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCAGCAGCATCTG 181398
| ||||||||||| || ||||| ||||| ||||| || ||||| || |||||| | |
Sbjct 32388 GTTTAGGTATGCGTCCATGGATTGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCAACAG 32329
Query 181399 CTGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCA 181458
|||||||| | |||| || |||||||||||||||||||||| | ||||| | || |
Sbjct 32328 CTGTATTCATCATCTACCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTA 32269
Query 181459 TCTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAGCACAA 181504
| ||||||||||| |||| |||| | || |||||||| ||||| ||
Sbjct 32268 TTTCTGGTACATTTAACTTCATGATCGTATTCCAAGCTGAGCATAA 32223
Score = 336 bits (372), Expect = 3e-87
Identities = 348/456 (76%), Gaps = 0/456 (0%)
Strand=Plus/Minus
Query 181503 AACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGTATTTGGTGGTTCACTG 181562
|||||||| ||||| || ||||| ||| | || || || |||||||||||||||||| |
Sbjct 31300 AACATTCTAATGCACCCATTCCATATGCTAGGCGTTGCCGGTGTATTTGGTGGTTCATTA 31241
Query 181563 TTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACT 181622
||| ||| ||||||||||| | || || ||||| || | ||||| || ||||| |
Sbjct 31240 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTCTAATTCGTGAAACAACTGAGAAC 31181
Query 181623 GAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCC 181682
|| ||| ||| | |||||||| ||||| ||||||||||| || ||||||||||| ||
Sbjct 31180 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 31121
Query 181683 GCCCACGGTTACTTTGGTCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCA 181742
|| || || ||||| ||||| || || |||||||| ||||| || |||||||| ||||||
Sbjct 31120 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATACGCTTCTTTTAACAACTCTCGTTCA 31061
Query 181743 CTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTA 181802
| || |||||| | || || ||||| || ||||| || ||||| || || | || |
Sbjct 31060 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTTACTGCTTTAGGTATT 31001
Query 181803 AGCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCTATCCTCGACGGACAA 181862
|| ||||| || ||| | ||||| |||||||||||||| || | | || ||||
Sbjct 31000 TCAACTATGGCTTTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 30941
Query 181863 GGACGTGTCCTCAACACCTGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTC 181922
|| ||||| | ||||| ||||| ||| | ||||||||||| || || ||||||||
Sbjct 30940 GGCCGTGTTATTAACACTTGGGCTGACATTATCAACCGTGCCAACCTTGGTATGGAAGTA 30881
Query 181923 ATGCACGAGCGCAACGCGCACAACTTCCCGCTTGAT 181958
||||| ||||| ||||| |||||||||||| | |||
Sbjct 30880 ATGCATGAGCGTAACGCTCACAACTTCCCGTTAGAT 30845
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 614589942208000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |