Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_027132.1
Length=190768
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 542 3e-149
>seq2029
Length=64692
Score = 542 bits (600), Expect = 3e-149
Identities = 731/1013 (72%), Gaps = 4/1013 (0%)
Strand=Plus/Minus
Query 180020 GTTCGATGTCCTGGACGACTGGCTTAAACGCGACCGCTTTGTATTTGTGGGCTGGTCTGG 180079
||| ||||| | || ||||||||| |||||||| || || ||||| || ||||| ||
Sbjct 63379 GTTTGATGTTGTTGATGACTGGCTTCGTCGCGACCGTTTCGTTTTTGTAGGATGGTCAGG 63320
Query 180080 ACTACTACTTCTTCCC-ACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTT 180138
|||| || ||||| ||||| |||||||| |||| |||||| |||| || || | |
Sbjct 63319 GTTACTT-TTATTCCCGACTGCATATCTTGCACTTGGTGGTTGGTTTACAGGAACTACAT 63261
Query 180139 TTGTCACGAGTTGGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTC 180198
|||| || |||||| || || ||| | ||| |||| ||| | ||||| ||| ||||
Sbjct 63260 TTGTAACTTCTTGGTATACTCATGGTTTAGCTACTTCATATTTAGAAGGCTGTAA-TTTC 63202
Query 180199 TTA-CGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGG 180257
||| | || || || || || || || | ||||||||||||| | | | ||||||
Sbjct 63201 TTAACTGCTGCGGTTTCTACTCCAGCAAATAGTATGGGTCATTCTTTATTATTTCTTTGG 63142
Query 180258 GGTCCTGAGTCTCAGGGGAATTTCCAACGGTGGTGCCAACTTGGGGGACTCTGGAATTTC 180317
|| || || |||| || |||| || |||||||||||||| || || |||| ||||
Sbjct 63141 GGCCCAGAAGCTCAAGGTGATTTTACTCGTTGGTGCCAACTTGGAGGTCTTTGGACTTTC 63082
Query 180318 GTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTTATGCTACGCCAGTTTGAACTGGCA 180377
|| || || |||||| | || | || ||||| |||||||| || || |||||| | ||
Sbjct 63081 GTAGCCCTTCACGGTTCTTTTTCACTGATTGGTTTTATGCTTCGTCAATTTGAAATTGCT 63022
Query 180378 CGTCTTATTGGTATCCGTCCTTACAATGCTATTGCATTCTCTGGTCCTATCGCTGTATTT 180437
||| | || ||||| || || || ||||| || |||| ||| || |||| ||
Sbjct 63021 CGTTCAGTAAAAATTCGTCCATATAACGCGATTGCTTTTTCTGCTCCAATTTCTGTTTTC 62962
Query 180438 GTCAGCGTATTTCTCATCTACCCACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTT 180497
|| || || || || |||||| | ||||| || ||||||||||||| || ||||
Sbjct 62961 GTTTCTGTGTTCCTAATTTACCCATTAGGTCAATCAGGTTGGTTCTTTGCACCAAGTTTT 62902
Query 180498 GGGGTAGCAGCAATCTTTAGATTCCTACTCTTTCTTCAGGGTTTCCACAACTGGACCCTC 180557
|| || || ||||| || | || | | ||| |||| || ||||| |||||||| |
Sbjct 62901 GGTGTTGCGGCAATTTTCCGTTTTATCTTATTTTTTCAAGGCTTCCATAACTGGACTTTA 62842
Query 180558 AACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCATTGCTATCAGCAATC 180617
||||| |||||||||||||| || |||||| ||||||| | || || || | || ||
Sbjct 62841 AACCCTTTCCATATGATGGGTGTAGCTGGTGTACTAGGAGCTGCGTTACTTTGCGCCATT 62782
Query 180618 CATGGCGTAACTGTGGAGAACACACTGTATGAAGATGGAGAACAAGCAAACACCTTTAAG 180677
||||| | ||||| || |||||||| | ||||||||| || |||||||| ||
Sbjct 62781 CATGGTGCTACTGTAGAAAACACACTTTTTGAAGATGGTGATGGTGCAAACACATTCCGT 62722
Query 180678 GCATTTGATTCAACGCAAGAGGAGGAAACTTACTCTATGGTCACTGCAAACCGCTTCTGG 180737
|| ||| | |||| |||| || ||||| ||||||||||| ||||| ||| | || |||
Sbjct 62721 GCGTTTAACCCAACTCAAGCAGAAGAAACATACTCTATGGTAACTGCTAACAGATTTTGG 62662
Query 180738 TCGCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTT 180797
|| || ||||| ||| | || |||||||| || || ||| | || || || ||| | |||
Sbjct 62661 TCTCAAATCTTTGGTGTAGCTTTTTCTAATAAACGTTGGTTACACTTCTTTATGCTTTTT 62602
Query 180798 GTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTT 180857
|| ||||| | || || |||| ||||||| | | ||||| ||| | ||| |
Sbjct 62601 GTTCCTGTAACAGGGCTTTGGATGAGTGCTATTGGTGTAGTAGGTCTAGCTTTAAACTTA 62542
Query 180858 CGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACG 180917
||||||||||||||||| ||||| || | || ||||||||||| || || || ||
Sbjct 62541 CGTGCTTACGATTTCGTTTCACAAGAAATTCGCGCTGCAGAAGATCCAGAATTTGAAACT 62482
Query 180918 TTCTACACCAAGAACATCCTATTGAATGAAGGACTACGTGCATGGTTGGCACCTGCCGAT 180977
||||| ||||| || ||||| || || ||||| | ||||| ||| |||| || |||
Sbjct 62481 TTCTATACCAAAAATATCCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGAT 62422
Query 180978 CAACCACACGAAAACTTCATCTTCCCTGAAGAAGTTCTACCAAGAGGTAACGC 181030
|| || || ||||| | | |||||||| || ||| ||||| | || |||||
Sbjct 62421 CAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGC 62369
Score = 421 bits (466), Expect = 8e-113
Identities = 410/525 (78%), Gaps = 2/525 (0%)
Strand=Plus/Minus
Query 178861 TTCTGCGAGTGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTG 178920
|| || |||||||| || ||| | || ||||| || | |||||||| ||||| |
Sbjct 32746 TTTTGTGAGTGGGTTACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATTA 32687
Query 178921 ATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 178979
||||||||||| || | |||||||| || || || ||| | ||||| | ||||||||
Sbjct 32686 ATGATTCCTACTTTATTAACTGCAACT-TCAGTGTTTATCATCGCTTTTATCGCAGCACC 32628
Query 178980 TCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAA 179039
||| || ||||| || || |||||||| || || |||||||||| | || ||||||||
Sbjct 32627 TCCTGTTGATATCGATGGTATCCGTGAGCCAGTTTCTGGTTCACTTTTATACGGAAACAA 32568
Query 179040 CATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCAT 179099
|||||| ||||||||| || | || | ||| |||||||| ||| |||| |||||||| ||
Sbjct 32567 CATCATTTCTGGTGCTATTATTCCTACTTCTAACGCAATCGGTTTACATTTCTACCCTAT 32508
Query 179100 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTAGT 179159
||||||||||| || || || || ||| | || ||||||||||||| |||||| | ||
Sbjct 32507 TTGGGAAGCAGCTTCTCTTGACGAATGGTTATACAACGGTGGTCCTTACCAACTTATCGT 32448
Query 179160 CTTCCACTTCCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 179219
| || ||| | | || |||| | | || ||||| |||||||||||| | |||| |||
Sbjct 32447 TTGTCATTTCTTCTTAGGAATCTGTTCTTACATGGGTCGTGAGTGGGAATTATCTTTCCG 32388
Query 179220 TCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGC 179279
| ||||||||||||||||||| ||||| ||||| |||||||| ||||| || | ||
Sbjct 32387 TTTAGGTATGCGTCCATGGATTGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCAACAGC 32328
Query 179280 AGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTAT 179339
|||||| || |||| || |||||||||||||||||||||||| ||||||| | |||||
Sbjct 32327 TGTATTCATCATCTACCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTAT 32268
Query 179340 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAA 179384
|||||||| ||||||| |||| | ||||||||||| || || ||
Sbjct 32267 TTCTGGTACATTTAACTTCATGATCGTATTCCAAGCTGAGCATAA 32223
Score = 392 bits (434), Expect = 4e-104
Identities = 376/482 (78%), Gaps = 0/482 (0%)
Strand=Plus/Minus
Query 179383 AACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTT 179442
||||| || |||||||| ||||||||||| || ||||| || ||||| ||||| || |
Sbjct 31300 AACATTCTAATGCACCCATTCCATATGCTAGGCGTTGCCGGTGTATTTGGTGGTTCATTA 31241
Query 179443 TTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCGCTTGTTCGTGAAACAACTGAGACA 179502
||||||||||||||||| || || ||||| || || ||||||||||||||||||
Sbjct 31240 TTCTCTGCTATGCACGGTTCACTTGTAACTTCTTCTCTAATTCGTGAAACAACTGAGAAC 31181
Query 179503 GAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCA 179562
|| ||| ||| | ||||| || ||||| ||||||||||| || || |||||||| |||
Sbjct 31180 GAATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 31121
Query 179563 GCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCT 179622
|| |||||||||||||||||||| || |||||||| || || ||||||||||| || ||
Sbjct 31120 GCTCATGGCTACTTCGGTCGTTTAATTTTCCAATACGCTTCTTTTAACAACTCTCGTTCA 31061
Query 179623 TTGCACTTCTTCCTTGCTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTG 179682
|| || |||||| | ||||| ||||| ||||| || || ||||| |||||| | || |
Sbjct 31060 TTACATTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTTACTGCTTTAGGTATT 31001
Query 179683 TCAACCATGGCGTTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAA 179742
||||| ||||| |||||| | || ||||||||||||||||| || | | || |||
Sbjct 31000 TCAACTATGGCTTTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 30941
Query 179743 GGACGTGTCCTTAACACATGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTT 179802
|| ||||| ||||||| ||||| ||| | | |||||||| | |||||||||||
Sbjct 30940 GGCCGTGTTATTAACACTTGGGCTGACATTATCAACCGTGCCAACCTTGGTATGGAAGTA 30881
Query 179803 ATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTGCTGCTGCTGAGTCTACACCT 179862
||||||||||||||||| ||||||||||| | || | || | || ||| || || ||
Sbjct 30880 ATGCATGAGCGTAACGCTCACAACTTCCCGTTAGATTTAGCGGTTGTTGAAGCTCCAGCT 30821
Query 179863 GT 179864
||
Sbjct 30820 GT 30819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 610302135168000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |