Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05] 3,600 sequences; 37,342,230 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq538 84.2 3e-11 >seq538 Length=19016 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/158 (73%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| || ||||| || ||||| || || | | ||| | ||||| ||||| ||||| Sbjct 16873 GCATGCAAAGTCTGTGTGCAGGCCTTCGTCACGAGAAATGAGCTCGTTTGAAAAGGTGAG 16814 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAG-ATCCAGAAAAGA 39734 || ||||| || || ||||| |||||||| || |||| |||| ||| | || || |||| Sbjct 16813 GCCGGGCATGAGCCCTCGCTTCTTGAGCCAGAAGATGG-AGCAGAAGGAGCCGGAGAAGA 16755 Query 39735 AGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCT 39772 ||||||| || || ||||| |||| || | |||| Sbjct 16754 AGATGCCCTCCACGCAAGCAAACGCAATCAGGCGCTCT 16717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686877889104000