Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorella_20vulgaris_20[genbank_20GCA_5F001021125.1_202015-06-05]
3,600 sequences; 37,342,230 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq538 114 2e-20
seq3285 87.8 2e-12
>seq538
Length=19016
Score = 114 bits (126), Expect = 2e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||| || || || || || ||||| || || ||||| ||| || ||
Sbjct 16869 GCAAAGTCTGTGTGCAGGCCTTCGTCACGAGAAATGAGCTCGTTTGAAAAGGTGAGGCCG 16810
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778
|||||||| || |||||||| | ||| | || | |||||| || ||||||||||||||
Sbjct 16809 GGCATGAGCCCTCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAGATG 16750
Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA 122816
|||||||| || |||||||||| ||||| || | |||
Sbjct 16749 CCCTCCACGCAAGCAAACGCAATCAGGCGCTCTGAGAA 16712
>seq3285
Length=63365
Score = 87.8 bits (96), Expect = 2e-12
Identities = 112/152 (74%), Gaps = 3/152 (2%)
Strand=Plus/Minus
Query 122715 ACCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAA 122774
||| |||||||| ||||||||||| ||| | || | |||||| || || ||||||
Sbjct 18868 ACCAGGCATGAGCTGCCGCTTCTTCAGCCAGAAGATCGAGCAGAAAGAGCCAGAGAAGTG 18809
Query 122775 GATACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATC 122834
||| |||||||||||||| | || | ||| || || || ||| ||| || | ||
Sbjct 18808 GATGCCCTCCACACACGCGTAGGCGACAAGCCGCTCTGCAAAGCAGC--TGCTGCTC-TC 18752
Query 122835 AAACCATTTCATTGCCCATTTCGCCTTCTTCT 122866
| ||| ||||| ||||| | |||||||||||
Sbjct 18751 TATCCACTTCATCGCCCACTGCGCCTTCTTCT 18720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628003738560000
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |